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Upload data from fauna to S3 #60

Upload data from fauna to S3

Upload data from fauna to S3 #60

Workflow file for this run

name: Upload data from fauna to S3
# Only support manual trigger of this workflow.
on:
workflow_dispatch:
inputs:
triggerPublic:
description: "Trigger Nextstrain public builds"
required: true
type: boolean
publicDockerImage:
description: "Specific container image to use for Nextstrain public builds"
required: false
type: string
triggerPrivateNextflu:
description: "Trigger private Nextflu builds"
required: true
type: boolean
privateNextfluDockerImage:
description: "Specific container image to use for private Nextflu builds"
required: false
type: string
jobs:
upload:
permissions:
id-token: write
uses: nextstrain/.github/.github/workflows/pathogen-repo-build.yaml@master
secrets: inherit
with:
runtime: docker
run: |
nextstrain build \
--env AWS_ACCESS_KEY_ID \
--env AWS_SECRET_ACCESS_KEY \
--env RETHINK_AUTH_KEY \
--env RETHINK_HOST \
. \
-j 4 \
upload_all_titers \
upload_all_raw_sequences \
upload_all_sequences \
upload_all_metadata \
--configfile profiles/upload.yaml
trigger-public-builds:
needs: [upload]
if: ${{ inputs.triggerPublic }}
runs-on: ubuntu-latest
steps:
- name: Trigger Nextstrain public builds
run: |
gh workflow run \
run-public-builds.yaml \
--repo nextstrain/seasonal-flu \
-f dockerImage=${{ github.event.inputs.publicDockerImage }}
env:
GITHUB_TOKEN: ${{ github.token }}
trigger-private-nextflu-builds:
needs: [upload]
if: ${{ inputs.triggerPrivateNextflu }}
runs-on: ubuntu-latest
steps:
- name: Trigger private Nextflu builds
run: |
gh workflow run \
run-private-nextflu-builds.yaml \
--repo nextstrain/seasonal-flu \
-f dockerImage=${{ github.event.inputs.privateNextfluDockerImage }}
env:
GITHUB_TOKEN: ${{ github.token }}