nf-core CI

Minor changes to auxilliary script #2803

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Job	Run time
Run pipeline with test data (23.04.0, -profile test,docker --preprocessing_tool fastp --preproces...	7m 12s
Run pipeline with test data (23.04.0, -profile test,docker --preprocessing_tool adapterremoval --...	8m 2s
Run pipeline with test data (23.04.0, -profile test,docker --mapping_tool bwamem --run_mapdamage_...	19m 9s
Run pipeline with test data (23.04.0, -profile test,docker --mapping_tool bowtie2 --damagecalcula...	8m 46s
Run pipeline with test data (23.04.0, -profile test,docker --mapping_tool circularmapper --skip_p...	8m 11s
Run pipeline with test data (23.04.0, -profile test_humanbam,docker --run_mtnucratio --run_contam...	16m 2s
Run pipeline with test data (23.04.0, -profile test_humanbam,docker --run_sexdeterrmine --run_gen...	14m 17s
Run pipeline with test data (23.04.0, -profile test_multiref,docker)	17m 58s
Run pipeline with test data (latest-everything, -profile test,docker --preprocessing_tool fastp -...	8m 21s
Run pipeline with test data (latest-everything, -profile test,docker --preprocessing_tool adapter...	11m 3s
Run pipeline with test data (latest-everything, -profile test,docker --mapping_tool bwamem --run_...	19m 40s
Run pipeline with test data (latest-everything, -profile test,docker --mapping_tool bowtie2 --dam...	5m 41s
Run pipeline with test data (latest-everything, -profile test,docker --mapping_tool circularmappe...	7m 52s
Run pipeline with test data (latest-everything, -profile test_humanbam,docker --run_mtnucratio --...	15m 37s
Run pipeline with test data (latest-everything, -profile test_humanbam,docker --run_sexdeterrmine...	14m 13s
Run pipeline with test data (latest-everything, -profile test_multiref,docker)	13m 52s
	3h 15m 56s