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Implement ffq #100

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Implement ffq #100

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Commits on Jun 30, 2022

  1. Add ffq to fetch metadata

    @drpatelh
    drpatelh committed Jun 30, 2022
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  2. Merge branch 'dev' of https://github.com/nf-core/fetchngs into updates

    @drpatelh
    drpatelh committed Jun 30, 2022
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  3. Fix linting

    @drpatelh
    drpatelh committed Jun 30, 2022
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  4. Revert comments

    @drpatelh
    drpatelh committed Jun 30, 2022
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Commits on Jul 1, 2022

  1. Install ffq module from nf-core modules

    @drpatelh
    drpatelh committed Jul 1, 2022
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  2. Fix API call for SRA ids

    @drpatelh
    drpatelh committed Jul 1, 2022
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  3. Update API call for GEO ids - still broken

    @drpatelh
    drpatelh committed Jul 1, 2022
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  4. Change default function to resolve GSM ids

    @drpatelh
    drpatelh committed Jul 1, 2022
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  5. Bump pipeline version to 1.7

    @drpatelh
    drpatelh committed Jul 1, 2022
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  6. Strip out mention of GEO ids everywhere

    @drpatelh
    drpatelh committed Jul 1, 2022
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  7. Strip out regex for GEO from input schema

    @drpatelh
    drpatelh committed Jul 1, 2022
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  8. Merge pull request nf-core#102 from drpatelh/api 

    Fix breaking changes introduced in the NCBI API
    @drpatelh
    drpatelh authored Jul 1, 2022
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  9. Merge branch 'dev' of https://github.com/nf-core/fetchngs into updates

    @drpatelh
    drpatelh committed Jul 1, 2022
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