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Test genome only download runs from NCBI DOWNLOAD #44

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chriswyatt1 opened this issue Oct 24, 2024 · 0 comments
Open

Test genome only download runs from NCBI DOWNLOAD #44

chriswyatt1 opened this issue Oct 24, 2024 · 0 comments
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enhancement New feature or request

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@chriswyatt1
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I think it will be possible to run the pipeline potentially with Genbank accessions (GCA.......).

At the moment, either you supply the genome + annotation manually, or use NCBI DOWNLOAD on a Refseq ID (GCF......) to get the genome and annotation automatically.

GCA accensions often only link to a genome wihtout a annotation in GFF, but these people may want to run.

We should test if this is a possible feature to add

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Labels
enhancement New feature or request
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