[tabulartogseachip] add versions snapshot

nf-core · Dec 13, 2024 · 5593d42 · 5593d42
1 parent 754d1b6
commit 5593d42
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Showing 3 changed files with 10 additions and 5 deletions.
diff --git a/modules/nf-core/custom/tabulartogseachip/main.nf b/modules/nf-core/custom/tabulartogseachip/main.nf
@@ -38,7 +38,7 @@ process CUSTOM_TABULARTOGSEACHIP {
 
     cat <<-END_VERSIONS > versions.yml
     "${task.process}":
-        bash: \$(echo \$(bash --version | grep -Eo 'version [[:alnum:].]+' | sed 's/version //'))
+        version: \$(echo $VERSION)
     END_VERSIONS
     """
 }
diff --git a/modules/nf-core/custom/tabulartogseachip/tests/main.nf.test b/modules/nf-core/custom/tabulartogseachip/tests/main.nf.test
@@ -24,8 +24,10 @@ nextflow_process {
         then {
             assertAll(
                 { assert process.success },
-                { assert snapshot(process.out.chip).match() },
-                { assert file(process.out.versions[0]).text.contains('bash') }
+                { assert snapshot(
+                    process.out.chip,
+                    process.out.versions
+                ).match() }
             )
         }
 

diff --git a/modules/nf-core/custom/tabulartogseachip/tests/main.nf.test.snap b/modules/nf-core/custom/tabulartogseachip/tests/main.nf.test.snap
@@ -3,12 +3,15 @@
         "content": [
             [
                 "SRP254919.salmon.merged.gene_counts.top1000cov.chip:md5,2ab8a685c675ce2fb97142526766044a"
+            ],
+            [
+                "versions.yml:md5,8416d7d8e5723a32c360278d4a1c4597"
             ]
         ],
         "meta": {
             "nf-test": "0.9.2",
             "nextflow": "24.10.2"
         },
-        "timestamp": "2024-12-13T14:25:21.122994122"
+        "timestamp": "2024-12-13T15:37:38.643112727"
     }
-}
+}