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fix special characters in samtools/view container
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tkchafin committed Nov 20, 2024
1 parent ba85edc commit b3cf3ef
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion modules/nf-core/samtools/view/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ process SAMTOOLS_VIEW {
conda "${moduleDir}/environment.yml"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/9e/9edc2564215d5cd137a8b25ca8a311600987186d406b092022444adf3c4447f7/data' :
'community.wave.seqera.io/library/htslib_samtools:1.21--6cb89bfd40cbaabf' }"
'community.wave.seqera.io/library/htslib_samtools:1.21--6cb89bfd40cbaabf' }"

input:
tuple val(meta), path(input), path(index)
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