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update preseq/lcextrap errorStrategy to ignore #7011

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@sateeshperi sateeshperi changed the title update errorStrategy to ignore update preseq/lcextrap errorStrategy to ignore Nov 18, 2024
@edmundmiller
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@sateeshperi what about #5091 ?

@@ -1,7 +1,7 @@
process PRESEQ_LCEXTRAP {
tag "$meta.id"
label 'process_single'
label 'error_retry'
label 'error_ignore'
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Can we remove the label and make a custom one?

Retry it once, then if it fails the second time we ignore it?

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label 'error_retry_ignore' ?

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No just define the error strategy at that point 😂

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Retrying once and then failing sounds great, from what I recall this fails anytime the sample doesn't have enough depth.

@sateeshperi sateeshperi deleted the fix/preseq-lcextrap branch November 22, 2024 08:10
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3 participants