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Bump dev version 1.1.0dev #162

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Oct 10, 2024
Merged

Bump dev version 1.1.0dev #162

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9e83630
Merge pull request #158 from nf-core/dev
luisas Oct 4, 2024
970b312
Add Zenodo DOI
JoseEspinosa Oct 4, 2024
f0dbfe2
Bump dev version
JoseEspinosa Oct 4, 2024
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5 changes: 2 additions & 3 deletions README.md
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Expand Up @@ -6,7 +6,7 @@
</h1>

[![GitHub Actions CI Status](https://github.com/nf-core/multiplesequencealign/actions/workflows/ci.yml/badge.svg)](https://github.com/nf-core/multiplesequencealign/actions/workflows/ci.yml)
[![GitHub Actions Linting Status](https://github.com/nf-core/multiplesequencealign/actions/workflows/linting.yml/badge.svg)](https://github.com/nf-core/multiplesequencealign/actions/workflows/linting.yml)[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/multiplesequencealign/results)[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.XXXXXXX-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.XXXXXXX)
[![GitHub Actions Linting Status](https://github.com/nf-core/multiplesequencealign/actions/workflows/linting.yml/badge.svg)](https://github.com/nf-core/multiplesequencealign/actions/workflows/linting.yml)[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/multiplesequencealign/results)[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.13889386-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.13889386)
[![nf-test](https://img.shields.io/badge/unit_tests-nf--test-337ab7.svg)](https://www.nf-test.com)

[![Nextflow](https://img.shields.io/badge/nextflow%20DSL2-%E2%89%A524.04.1-23aa62.svg)](https://www.nextflow.io/)
Expand Down Expand Up @@ -125,8 +125,7 @@ For further information or help, don't hesitate to get in touch on the [Slack `#

## Citations

<!-- TODO nf-core: Add citation for pipeline after first release. Uncomment lines below and update Zenodo doi and badge at the top of this file. -->
<!-- If you use nf-core/multiplesequencealign for your analysis, please cite it using the following doi: [10.5281/zenodo.XXXXXX](https://doi.org/10.5281/zenodo.XXXXXX) -->
If you use nf-core/multiplesequencealign for your analysis, please cite it using the following doi: [10.5281/zenodo.13889386](https://doi.org/10.5281/zenodo.13889386)

An extensive list of references for the tools used by the pipeline can be found in the [`CITATIONS.md`](CITATIONS.md) file.

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4 changes: 2 additions & 2 deletions assets/multiqc_config.yml
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report_comment: >
This report has been generated by the <a href="https://github.com/nf-core/multiplesequencealign/releases/tag/1.0.0" target="_blank">nf-core/multiplesequencealign</a>
This report has been generated by the <a href="https://github.com/nf-core/multiplesequencealign/tree/dev" target="_blank">nf-core/multiplesequencealign</a>
analysis pipeline. For information about how to interpret these results, please see the
<a href="https://nf-co.re/multiplesequencealign/1.0.0/docs/output" target="_blank">documentation</a>.
<a href="https://nf-co.re/multiplesequencealign/dev/docs/output" target="_blank">documentation</a>.
report_section_order:
"nf-core-multiplesequencealign-methods-description":
order: -1000
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4 changes: 2 additions & 2 deletions nextflow.config
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Expand Up @@ -260,8 +260,8 @@ manifest {
description = """Pipeline to run and benchmark multiple sequence alignment tools."""
mainScript = 'main.nf'
nextflowVersion = '!>=24.04.1'
version = '1.0.0'
doi = ''
version = '1.1.0dev'
doi = 'https://doi.org/10.5281/zenodo.13889386'
}

// Load modules.config for DSL2 module specific options
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