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docs/output.md

@@ -10,7 +10,7 @@ The directories listed below will be created in the results directory after the
 
 ## Outputs
 
-Each _query_ genome, is aligned to the _target_ genome, and each alignment is visualised with dot plots.  The output file names are constructed by concatenating the _target_ and _query_ sample identifiers with a `___` separator (three underscores), to faciliate re-extraction of the IDs from file names.  The file suffixes are as follows:
+Each _query_ genome, is aligned to the _target_ genome, and each alignment is visualised with dot plots. The output file names are constructed by concatenating the _target_ and _query_ sample identifiers with a `___` separator (three underscores), to faciliate re-extraction of the IDs from file names. The file suffixes are as follows:
 
 - `.train` is the alignment parameters computed by `last-train` (optional)
 - `m2m_aln` is the _**many-to-many**_ alignment between _target_ and _query_ genomes. (optional through the `--m2m` option)