Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Updated tests and fusion containers and conda versions, general confi… #550

Open
wants to merge 21 commits into
base: dev
Choose a base branch
from
Open

Updated tests and fusion containers and conda versions, general confi… #550

wants to merge 21 commits into from
+1,030 −129

Commits on Nov 28, 2024

  1. Updated tests and fusion containers and conda versions, general confi… 

    …g, and ci.yml
    @nschcolnicov
    nschcolnicov committed Nov 28, 2024
    Configuration menu
    Copy the full SHA
    eece50d View commit details
    Browse the repository at this point in the history

  2. Merge branch 'dev' of https://github.com/nf-core/rnafusion into gener… 

    …al_fixes
    @nschcolnicov
    nschcolnicov committed Nov 28, 2024
    Configuration menu
    Copy the full SHA
    3058f0c View commit details
    Browse the repository at this point in the history

  3. Updated ci.yml and nftests

    @nschcolnicov
    nschcolnicov committed Nov 28, 2024
    Configuration menu
    Copy the full SHA
    704d23d View commit details
    Browse the repository at this point in the history

  4. Pulled from optional_cosmic branch

    @nschcolnicov
    nschcolnicov committed Nov 28, 2024
    Configuration menu
    Copy the full SHA
    56ea6b4 View commit details
    Browse the repository at this point in the history

  5. Update tests

    @nschcolnicov
    nschcolnicov committed Nov 28, 2024
    Configuration menu
    Copy the full SHA
    fa4f771 View commit details
    Browse the repository at this point in the history

Commits on Nov 29, 2024

  1. Update test_build test and add it to ci

    @nschcolnicov
    nschcolnicov committed Nov 29, 2024
    Configuration menu
    Copy the full SHA
    90d309d View commit details
    Browse the repository at this point in the history

  2. Pulled from dev

    @nschcolnicov
    nschcolnicov committed Nov 29, 2024
    Configuration menu
    Copy the full SHA
    9b4180a View commit details
    Browse the repository at this point in the history

  3. Update test_build_stub

    @nschcolnicov
    nschcolnicov committed Nov 29, 2024
    Configuration menu
    Copy the full SHA
    18bf7c0 View commit details
    Browse the repository at this point in the history

  4. Pulled from dev

    @nschcolnicov
    nschcolnicov committed Nov 29, 2024
    Configuration menu
    Copy the full SHA
    d7f791f View commit details
    Browse the repository at this point in the history

Commits on Dec 2, 2024

  1. Merge branch 'dev' of https://github.com/nf-core/rnafusion into gener… 

    …al_fixes
    @nschcolnicov
    nschcolnicov committed Dec 2, 2024
    Configuration menu
    Copy the full SHA
    d026414 View commit details
    Browse the repository at this point in the history

Commits on Dec 3, 2024

  1. Added test_build test

    @nschcolnicov
    nschcolnicov committed Dec 3, 2024
    Configuration menu
    Copy the full SHA
    2be6ceb View commit details
    Browse the repository at this point in the history

  2. Pulled from dev

    @nschcolnicov
    nschcolnicov committed Dec 3, 2024
    Configuration menu
    Copy the full SHA
    d379b8f View commit details
    Browse the repository at this point in the history

  3. Update snaps

    @nschcolnicov
    nschcolnicov committed Dec 3, 2024
    Configuration menu
    Copy the full SHA
    144c780 View commit details
    Browse the repository at this point in the history

  4. Updated rrnatranscripts

    @nschcolnicov
    nschcolnicov committed Dec 3, 2024
    Configuration menu
    Copy the full SHA
    b06bc4e View commit details
    Browse the repository at this point in the history

  5. Use latest-stable instead of latest-everything in CI

    @nschcolnicov
    nschcolnicov committed Dec 3, 2024
    Configuration menu
    Copy the full SHA
    2519d66 View commit details
    Browse the repository at this point in the history

  6. Addressing PR comments

    @nschcolnicov
    nschcolnicov committed Dec 3, 2024
    Configuration menu
    Copy the full SHA
    bd419d4 View commit details
    Browse the repository at this point in the history

  7. Updated snaps

    @nschcolnicov
    nschcolnicov committed Dec 3, 2024
    Configuration menu
    Copy the full SHA
    0f88731 View commit details
    Browse the repository at this point in the history

  8. Pulled from dev

    @nschcolnicov
    nschcolnicov committed Dec 3, 2024
    Configuration menu
    Copy the full SHA
    4c68f9a View commit details
    Browse the repository at this point in the history

  9. add missing conda lines

    @nschcolnicov
    nschcolnicov committed Dec 3, 2024
    Configuration menu
    Copy the full SHA
    474a89e View commit details
    Browse the repository at this point in the history

Commits on Dec 4, 2024

  1. Update snaps and profile resources

    @nschcolnicov
    nschcolnicov committed Dec 4, 2024
    Configuration menu
    Copy the full SHA
    be02390 View commit details
    Browse the repository at this point in the history

  2. Add salmon index skip parameter

    @nschcolnicov
    nschcolnicov committed Dec 4, 2024
    Configuration menu
    Copy the full SHA
    9683f58 View commit details
    Browse the repository at this point in the history