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Lint that module nf-tests use a single config with sourcing the args from params #3277

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mahesh-panchal opened this issue Nov 14, 2024 · 0 comments

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mahesh-panchal commented Nov 14, 2024

Description of feature

From nf-core/website#2832 (comment)

More importantly do we have an issue to create linting around this?

what exactly should we lint for?

A single nextflow.config file in tests, and that it contains the string ext.args = params., and not ext.args = [{'"]

Also the same if ext.prefix is used. Check the string starts with ext.prefix = params. Although I'm not sure if ext.prefix has a need to be used in a test config.

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