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Merge pull request #18 from nfdi4plants/protocol-properties
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Some updates on protocol profile
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floWetzels authored Jun 20, 2024
2 parents 05161f5 + a7bda35 commit 23ed35d
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7 changes: 3 additions & 4 deletions profile/isa_ro_crate.md
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Expand Up @@ -164,16 +164,15 @@ Is based on the Bioschemas [bioschemas.org/LabProtocol](https://bioschemas.org/L
|----------|----------|---------------|-------------|
|@type |MUST|Text|must be '[bioschemas.org/LabProtocol](https://bioschemas.org/LabProtocol)'|
|@id|MUST|Text or URL|Could be the url pointing to the protocol resource.|
|url|MUST|URL|Pointer to protocol resources external to the ISA-Tab that can be accessed by their Uniform Resource Identifier (URI).|
|headline|SHOULD|Text|Main title of the LabProtocol.|
|name|SHOULD|Text|Main title of the LabProtocol.|
|intendedUse|SHOULD|[schema.org/DefinedTerm](https://schema.org/DefinedTerm) or Text or URL|The protocol type as an ontology term|
|description|SHOULD|Text|A short description of the protocol (e.g. an abstract)|
|url|COULD|URL|Pointer to protocol resources external to the ISA-Tab that can be accessed by their Uniform Resource Identifier (URI).|
|comment|COULD|[schema.org/Comment](https://schema.org/Comment)|Comment|
|version|COULD|Number or Text|An identifier for the version to ensure protocol tracking.|
|labEquipment|COULD|[schema.org/DefinedTerm](https://schema.org/DefinedTerm) or [schema.org/PropertyValue](https://schema.org/PropertyValue) or Text or URL|For LabProtocols it would be a laboratory equipment use by a person to follow one or more steps described in this LabProtocol.|
|reagent|COULD|[schema.org/BioChemEntity](https://schema.org/BioChemEntity://bioschemas.org/Sample) or [schema.org/DefinedTerm](https://schema.org/DefinedTerm) or [schema.org/PropertyValue](https://schema.org/PropertyValue) or Text or URL|Reagents used in the protocol.|
|computationalTool|COULD|[schema.org/DefinedTerm](https://schema.org/DefinedTerm) or [schema.org/PropertyValue](https://schema.org/PropertyValue) or [schema.org/SoftwareApplication](https://schema.org/SoftwareApplication)|Software or tool used as part of the lab protocol to complete a part of it.|
|sameAs|COULD|URL|URL of a reference Web page that unambiguously indicates the item's identity. E.g. the URL of the item's Wikipedia page, Wikidata entry, or official website.|

### Sample

Expand Down Expand Up @@ -253,4 +252,4 @@ It is based on [schema.org/ScholarlyArticle](https://schema.org/ScholarlyArticle

## Example ro-crate-metadata.json

_TODO: simple example and a link to a more complete example_
_TODO: simple example and a link to a more complete example_

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