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Data Fragment Selectors #28

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Data Fragment Selectors #28

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4f59753
Fragment Selectors in profile description
floWetzels Sep 27, 2024
5e7f7de
Fragment selectors in mapping
floWetzels Sep 27, 2024
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3 changes: 2 additions & 1 deletion profile/isa_ro_crate.md
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Expand Up @@ -189,7 +189,7 @@ Is based on the Bioschemas [bioschemas.org/Sample](https://bioschemas.org/Sample

### Data

Describes and points to a Data file, and maps to the [ISA-JSON Data](https://isa-specs.readthedocs.io/en/latest/isajson.html#data-schema-json)
Describes and points to a Data file or a segment of a Data file (via [data fragment selectors](https://www.w3.org/TR/annotation-model/#fragment-selector)), and maps to the [ISA-JSON Data](https://isa-specs.readthedocs.io/en/latest/isajson.html#data-schema-json)

| Property | Required | Expected Type | Description |
|----------|----------|---------------|-------------|
Expand All @@ -199,6 +199,7 @@ Describes and points to a Data file, and maps to the [ISA-JSON Data](https://isa
|comment|COULD|[schema.org/Comment](https://schema.org/Comment)|Comment|
|disambiguatingDescription|COULD|Text|The type of the data file (“Raw Data File", “Derived Data File" or "Image File").|
|encodingFormat|COULD|Text of URL|Media format as a MIME type|
|usageInfo|COULD|Text of URL|Description/specification of the [data fragment selector](https://www.w3.org/TR/annotation-model/#fragment-selector), if the object describes a data fragment and a selector is present in the path/`@id`|

### PropertyValue

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3 changes: 2 additions & 1 deletion profile/isa_ro_crate_mapping.md
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Expand Up @@ -95,6 +95,7 @@ This is the mapping between ISA-json types defined in https://isa-specs.readthed
|comments|comment||
|-|encodingFormat|ARC-specific property|
|type|disambiguatingDescription||
|-|usageInfo|ARC-specific property|
||
|[Person](https://isa-specs.readthedocs.io/en/latest/isajson.html#person-schema-json)|[schema.org/Person](https://schema.org/Person)|
|@id|@id||
Expand Down Expand Up @@ -160,4 +161,4 @@ The unit is again an ontology term that has to be resolved into a URL and a name
|unit|unitCode|Ontology URL of the unit.|
|unit|unitText|Name of the unit.|
|value|valueReference|Ontology URL or ontology term objetc of the value.|
|-|additionalType||Can be used to describe if the value is a factor, characteristic or parameter.|
|-|additionalType||Can be used to describe if the value is a factor, characteristic or parameter.|