NTR: response_to_gabapentin #342
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Update DOSDP pattern files | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| branches: [ master ] | |
| paths: | |
| - 'src/patterns/**' | |
| jobs: | |
| dosdp: | |
| runs-on: ubuntu-latest | |
| container: obolibrary/odkfull:v1.5 | |
| strategy: | |
| max-parallel: 1 | |
| steps: | |
| - name: Checkout main branch | |
| uses: actions/checkout@v2 | |
| with: | |
| ref: ${{ github.event.pull_request.head.ref }} | |
| - name: work around permission issue | |
| run: git config --global --add safe.directory "$GITHUB_WORKSPACE" | |
| - name: Refreshing DOSDP patterns files | |
| run: cd src/ontology/ && make ROBOT_ENV='ROBOT_JAVA_ARGS=-Xmx6G' GITHUB_ACTION=true ../patterns/definitions.owl | |
| - name: Run ontology QC checks | |
| run: cd src/ontology && make ROBOT_ENV='ROBOT_JAVA_ARGS=-Xmx6G' test IMP=false MIR=false | |
| - name: Commit changes | |
| uses: EndBug/add-and-commit@v9 | |
| with: | |
| message: 'Update dosdp patterns file' | |
| add: 'src/patterns/definitions.owl' |