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nb2galaxy prototype #132

nb2galaxy prototype

nb2galaxy prototype #132

Workflow file for this run

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: Python package
on:
push:
branches: [ master ]
pull_request:
branches: [ master ]
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version-env: [py39]
steps:
- uses: actions/checkout@v2
- name: Set up Python 3.9
uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install flake8 pytest wheel pytest-cov tox
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
git clone https://github.com/volodymyrss/nbworkflow-test.git tests/testrepo
- name: Lint with flake8
run: |
PYTHONPATH=./ tox -e flake8
- name: Test with pytest - no extras
run: |
pip install .
PYTHONPATH=./ tox -e ${{ matrix.python-version-env }}
- name: Test with pytest
run: |
pip install .[rdf,service,mmoda]
PYTHONPATH=./ tox -e ${{ matrix.python-version-env }}
- name: Codecov
uses: codecov/[email protected]