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baseline models are structured. util added #164

baseline models are structured. util added

baseline models are structured. util added #164

Triggered via push September 19, 2024 12:35
Status Failure
Total duration 38s
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build.yaml

on: push
Matrix: build
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temporaryFolder: /tmp/viash_hub_repo8765484971941630044 uri: https://github.com/openproblems-bio/openproblems.git Cloning into '.'... checkout out: List(git, checkout, tags/v2.0.0, --, .) 0 Config "run_robustness_analysis_causal": Could not find dependency 'control_methods/baseline_corr' temporaryFolder: /tmp/viash_hub_repo11855843075889034854 uri: https://github.com/openproblems-bio/openproblems.git Cloning into '.'... checkout out: List(git, checkout, tags/v2.0.0, --, .) 0 temporaryFolder: /tmp/viash_hub_repo2905110251928471987 uri: https://github.com/openproblems-bio/openproblems.git Cloning into '.'... checkout out: List(git, checkout, tags/v2.0.0, --, .) 0 temporaryFolder: /tmp/viash_hub_repo1859024551122237962 uri: https://github.com/openproblems-bio/openproblems.git Cloning into '.'... checkout out: List(git, checkout, tags/v2.0.0, --, .) 0 Unexpected error occurred! If you think this is a bug, please post create an issue at https://github.com/viash-io/viash/issues containing a reproducible example and the stack trace below. viash - 0.8.6 Stacktrace: java.lang.RuntimeException: No main script defined at io.viash.platforms.NextflowPlatform.renderMainNf(NextflowPlatform.scala:202) at io.viash.platforms.NextflowPlatform.modifyFunctionality(NextflowPlatform.scala:117) at io.viash.ViashBuild$.apply(ViashBuild.scala:36) at io.viash.ViashNamespace$.$anonfun$build$1(ViashNamespace.scala:101) at scala.collection.parallel.AugmentedIterableIterator.map2combiner(RemainsIterator.scala:107) at scala.collection.parallel.AugmentedIterableIterator.map2combiner$(RemainsIterator.scala:104) at scala.collection.parallel.immutable.ParVector$ParVectorIterator.map2combiner(ParVector.scala:70) at scala.collection.parallel.ParIterableLike$Map.leaf(ParIterableLike.scala:1020) at scala.collection.parallel.Task.$anonfun$tryLeaf$1(Tasks.scala:52) at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.scala:18) at scala.util.control.Breaks$$anon$1.catchBreak(Breaks.scala:97) at scala.collection.parallel.Task.tryLeaf(Tasks.scala:55) at scala.collection.parallel.Task.tryLeaf$(Tasks.scala:49) at scala.collection.parallel.ParIterableLike$Map.tryLeaf(ParIterableLike.scala:1017) at scala.collection.parallel.AdaptiveWorkStealingTasks$AWSTWrappedTask.internal(Tasks.scala:169) at scala.collection.parallel.AdaptiveWorkStealingTasks$AWSTWrappedTask.internal$(Tasks.scala:156) at scala.collection.parallel.AdaptiveWorkStealingForkJoinTasks$AWSFJTWrappedTask.internal(Tasks.scala:304) at scala.collection.parallel.AdaptiveWorkStealingTasks$AWSTWrappedTask.compute(Tasks.scala:149) at scala.collection.parallel.AdaptiveWorkStealingTasks$AWSTWrappedTask.compute$(Tasks.scala:148) at scala.collection.parallel.AdaptiveWorkStealingForkJoinTasks$AWSFJTWrappedTask.compute(Tasks.scala:304) at java.base/java.util.concurrent.RecursiveAction.exec(RecursiveAction.java:189) at java.base/java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) at java.base/java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) at java.base/java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) at java.base/java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) at java.base/java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) Suppressed: java.lang.RuntimeException: No main script defined ... 26 more Suppressed: java.lang.RuntimeException: No main script defined ... 26 more Suppressed: java.lang.RuntimeException: No main script defined ... 26 more Suppressed: java.lang.RuntimeException: No main script defined ... 26 more Suppressed: java.lang.RuntimeException: No main script defined at io.viash.platforms.NextflowPlatform.renderMainNf(NextflowPlatform.scala:202) at io.viash.platforms.NextflowPlatform.modifyFunctionality(NextflowPlatform.scala:117) at io.viash.ViashBuild$.apply(ViashBuild.scala:36) at io.viash.ViashNamespace$.$anonfun$build$1(ViashNamespace.scala:101) at scala.collection.parallel.AugmentedIterableIterator.map2combiner(RemainsIterato