More formatting #209
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Non-OMV-tests | |
| on: | |
| push: | |
| branches: [ master, development, experimental, ow* ] | |
| pull_request: | |
| branches: [ master, development, experimental, ow* ] | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.runs-on }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| runs-on: [ubuntu-latest, macos-latest ] | |
| python-version: [ 3.9, "3.10", "3.11", "3.12" ] | |
| exclude: | |
| - runs-on: macos-latest | |
| python-version: "3.8" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install HDF5 for pytables on macos-latest | |
| if: ${{ matrix.runs-on == 'macos-latest' }} | |
| run: | | |
| brew install hdf5 | |
| - name: Install OMV | |
| run: | | |
| pip install git+https://github.com/OpenSourceBrain/osb-model-validation | |
| - name: Install c302 | |
| run: | | |
| pip install . | |
| pip install WormNeuroAtlas | |
| pip list | |
| - name: Test WormNeuroAtlasReader | |
| run: | | |
| python -m c302.WormNeuroAtlasReader | |
| - name: Run some examples | |
| run: | | |
| cd c302 | |
| mkdir examples | |
| python c302_IClamp.py A | |
| pip install neuron | |
| #omv install NEURON # Need to install NEURON | |
| #which nrnivmodl | |
| #export NEURON_HOME=$RUNNER_TOOL_CACHE/Python/3.9.7/x64/ | |
| omv list -V | |
| - name: Run test script | |
| run: | | |
| ./test.sh | |
| - name: Final version info | |
| run: | | |
| pip list | |
| env |