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    80 repositories

    • host_facts

      Public
      Iterating over the Rest API to gather information about the HPC nodes
      Python
      •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

    • VAIDocker

      Public
      RHEL derivative containers for user admin on compute nodes
      Shell
      •
      GNU General Public License v2.0
      •0•3•2•0•Updated Nov 12, 2024Nov 12, 2024

    • EspresaUpdate2WDEIB

      Public
      Console app used for format Espresa payroll into WD EIB
      C#
      •0•0•0•0•Updated Oct 24, 2024Oct 24, 2024

    • hpcworkshop

      Public
      HPC Workshop
      0•1•0•0•Updated Oct 15, 2024Oct 15, 2024

    • bifurcatoR

      Public
      bifurcatoR package
      R
      •6•5•0•0•Updated Oct 10, 2024Oct 10, 2024

    • slurmpretty

      Public
      slurmPretty
      Perl
      •0•0•0•0•Updated Aug 15, 2024Aug 15, 2024

    • aws-restore

      Public
      awsRestore is a python script that runs on the command line for restoring entire folders and subfolders stored in AWS Glacier Deep Archive.
      Python
      •0•1•0•0•Updated Jun 24, 2024Jun 24, 2024

    • genomicsCoreFileMgmt

      Public
      tools to manage the VAI genomics core file lifecycle
      Perl
      •0•1•0•0•Updated Jun 3, 2024Jun 3, 2024

    • DUgen-pub

      Public
      web-based visualization of spectrum scale data usage. kind of like agedu
      JavaScript
      •0•0•0•0•Updated May 22, 2024May 22, 2024

    • motuz

      Public
      Motuz - A web based infrastructure for large scale data movements between on-premise and cloud
      JavaScript
      •
      MIT License
      •12•0•0•0•Updated Mar 26, 2024Mar 26, 2024

    • oodRstudio

      Public
      Open OnDemand apps, rstudio
      HTML
      •
      GNU General Public License v3.0
      •11•0•0•0•Updated Mar 13, 2024Mar 13, 2024

    • aws-cptac-sync

      Public
      Data transformation and integration service between CPTAC BCR and CDR.
      cptac
      JavaScript
      •0•0•0•1•Updated Jan 29, 2024Jan 29, 2024

    • graylog-docker-compose

      Public
      A set of Docker Compose files that allow you to quickly spin up a Graylog instance for testing or demo purposes.
      Apache License 2.0
      •143•0•0•0•Updated Jan 18, 2024Jan 18, 2024

    • ondemand_codeserver

      Public
      BETA - Batch Connect - OSC Code Server
      HTML
      •
      GNU General Public License v3.0
      •22•0•0•0•Updated Oct 12, 2023Oct 12, 2023

    • Admin-Tools

      Public
      Various scripts used to monitor the HPC environment.
      Perl
      •0•2•0•0•Updated Oct 3, 2023Oct 3, 2023

    • cloudfront-authorization-at-edge

      Public
      Protect downloads of your content hosted on CloudFront with Cognito authentication using cookies and Lambda@Edge
      TypeScript
      •
      MIT No Attribution
      •160•0•0•0•Updated Aug 13, 2023Aug 13, 2023

    • globus-connect-server-deploy

      Public
      Deployment tools for Globus Connect Server
      Shell
      •
      Apache License 2.0
      •8•0•0•0•Updated Nov 8, 2022Nov 8, 2022

    • pbc-iscan-qcarray

      Public
      Infinium QC Array workflow
      Python
      •1•0•0•0•Updated Nov 4, 2022Nov 4, 2022

    • rclone

      Public
      "rsync for cloud storage" - Google Drive, S3, Dropbox, Backblaze B2, One Drive, Swift, Hubic, Wasabi, Google Cloud Storage, Yandex Files
      Go
      •
      MIT License
      •4.3k•0•0•0•Updated Oct 7, 2022Oct 7, 2022

    • step-ca-DynamoDB

      Public
      Add an AWS DynamoDB implementation to step-ca
      Go
      •
      Apache License 2.0
      •23•0•0•0•Updated Oct 7, 2022Oct 7, 2022

    • Puppet-Environment

      Public archive
      The current Puppet environment in use at VAI.
      Ruby
      •0•1•0•9•Updated Oct 6, 2022Oct 6, 2022

    • awsHPCcompute

      Public
      compute nodes on hpc
      Shell
      •0•0•0•0•Updated Sep 6, 2022Sep 6, 2022

    • nsscache

      Public
      asynchronously synchronise local NSS databases with remote directory services
      Python
      •
      GNU General Public License v2.0
      •56•0•0•0•Updated Aug 22, 2022Aug 22, 2022

    • Biscuit_Snakemake_Workflow

      Public
      Snakemake Workflow For Running Biscuit https://github.com/huishenlab/biscuit
      Python
      •
      GNU General Public License v3.0
      •12•0•0•0•Updated Aug 10, 2022Aug 10, 2022

    • snakemake

      Public
      This is the development home of the workflow management system Snakemake. For general information, see
      HTML
      •
      MIT License
      •561•0•0•0•Updated Jul 25, 2022Jul 25, 2022

    • VAICryoTools

      Public
      various tools used to support cryoem from an IT perspective
      Perl
      •0•0•0•0•Updated Jul 14, 2022Jul 14, 2022

    • service-workbench-on-aws

      Public
      A platform that provides researchers with one-click access to collaborative workspace environments operating across teams, universities, and datasets while enabling university IT stakeholders to manage, monitor, and control spending, apply security best practices, and comply with corporate governance.
      JavaScript
      •
      Apache License 2.0
      •119•0•0•0•Updated Jul 2, 2022Jul 2, 2022

    • ADGroupManager

      Public
      command line management of groups using python. list,add,remove users from AD groups
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 20, 2022May 20, 2022

    • shinyBifurcatoR

      Public
      shiny interface for bifurcatoR
      BSD 2-Clause "Simplified" License
      •1•0•0•0•Updated May 18, 2022May 18, 2022

    • CentOS-Dockerfiles

      Public archive
      Dockerfiles for various common implementations
      Dockerfile
      •
      GNU General Public License v2.0
      •1.3k•0•0•0•Updated May 3, 2022May 3, 2022