Harvard Medical School - Department of Biomedical Informatics

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362 repositories

vizarr
Public
A minimal Zarr image viewer based on Viv.
jupyter-notebooks gehlenborglab zarr viv imjoy
TypeScript
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MIT License
•18•131•17•11•Updated Jan 1, 2025Jan 1, 2025
pic-sure-services
Public
Java
•
Apache License 2.0
•0•0•0•2•Updated Dec 31, 2024Dec 31, 2024
hypatio-app
Public
Python
•0•4•0•9•Updated Dec 30, 2024Dec 30, 2024
dbmi-fileservice
Public
Python
•0•2•0•5•Updated Dec 30, 2024Dec 30, 2024
fhirquestionnaire
Public
HTML
•0•2•0•4•Updated Dec 30, 2024Dec 30, 2024
dbmisvc-starter
Public
Python
•0•1•0•4•Updated Dec 30, 2024Dec 30, 2024
actions
Public
0•0•0•39•Updated Dec 30, 2024Dec 30, 2024
PIC-SURE-Frontend
Public
A frontend for the PIC-SURE API
TypeScript
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Apache License 2.0
•0•1•0•6•Updated Dec 30, 2024Dec 30, 2024
biodata_catalyst_stigmatizing_variables
Public
Jupyter Notebook
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Apache License 2.0
•0•1•0•2•Updated Dec 23, 2024Dec 23, 2024
pic-sure-hpds
Public
Java
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Apache License 2.0
•6•3•0•8•Updated Dec 23, 2024Dec 23, 2024
avillachlab-jenkins-bdc-etl
Public
Shell
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Apache License 2.0
•0•0•0•0•Updated Dec 20, 2024Dec 20, 2024
pic-sure-bdc-release-control
Public
Apache License 2.0
•8•1•0•0•Updated Dec 20, 2024Dec 20, 2024
cellpop
Public
TypeScript
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MIT License
•1•0•11•2•Updated Dec 20, 2024Dec 20, 2024
pic-sure-hpds-phenotype-load-example
Public
Jupyter Notebook
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Apache License 2.0
•1•0•0•2•Updated Dec 20, 2024Dec 20, 2024
DBMI-LZA-Dev
Public
Deploy a multi-account cloud foundation to support highly-regulated workloads and complex compliance requirements.
TypeScript
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Apache License 2.0
•464•0•0•0•Updated Dec 20, 2024Dec 20, 2024
pic-sure-metadata-curation
Public
Parse and generate variable-level data to be exposed through the search interface.
SAS
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Apache License 2.0
•2•2•0•0•Updated Dec 20, 2024Dec 20, 2024
chromoscope
Public
Interactive multiscale visualization for structural variation in human genomes
TypeScript
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MIT License
•7•66•32•3•Updated Dec 19, 2024Dec 19, 2024
pic-sure-all-in-one
Public
Shell
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Apache License 2.0
•12•4•0•2•Updated Dec 19, 2024Dec 19, 2024
ETL-MissionControl-dbgap-submodule
Public
ETL-MissionControl-dbgap-submodule
Shell
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Apache License 2.0
•0•0•0•0•Updated Dec 19, 2024Dec 19, 2024
ETLToolSuite-EntityGenerator
Public
This tool will generate Entity Files that can be used to load into Datasources.
Java
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Apache License 2.0
•1•0•0•0•Updated Dec 19, 2024Dec 19, 2024
picsure-dictionary-etl
Public
Java
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Apache License 2.0
•0•0•0•1•Updated Dec 19, 2024Dec 19, 2024
i2b2v2-webclient
Public
JavaScript
•4•2•1•1•Updated Dec 19, 2024Dec 19, 2024
pic-sure-baseline-release-control
Public
5•0•0•0•Updated Dec 19, 2024Dec 19, 2024
PIC-SURE-Migrations
Public
Database migrations for the PIC-SURE All-in-One.
Apache License 2.0
•0•0•0•1•Updated Dec 19, 2024Dec 19, 2024
pic-sure
Public
PIC-SURE API
Java
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Apache License 2.0
•3•5•0•7•Updated Dec 18, 2024Dec 18, 2024
picsure-dictionary
Public
Java
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Apache License 2.0
•1•0•0•2•Updated Dec 18, 2024Dec 18, 2024
pic-sure-bdc-infrastructure
Public
HCL
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Apache License 2.0
•1•5•0•3•Updated Dec 18, 2024Dec 18, 2024
avillachlab-jenkins
Public
HCL
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Apache License 2.0
•6•5•0•0•Updated Dec 18, 2024Dec 18, 2024
pic-sure-auth-microapp
Public
Java
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Apache License 2.0
•5•4•0•1•Updated Dec 18, 2024Dec 18, 2024
Access-to-Data-using-PIC-SURE-API
Public
Jupyter Notebook
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Apache License 2.0
•8•6•0•0•Updated Dec 17, 2024Dec 17, 2024