Repositories list

• linkml

  Public
  Linked Open Data Modeling Language

  schemalinked-datardf+ 13modelingsemantic-webowlstandardsdata-modelinghacktoberfestshex+ 6

  Python

  •

  Other

  •101•325•486•43•Updated Nov 22, 2024Nov 22, 2024

• linkml-model

  Public
  Link Modeling Language (LinkML) model

  yamlmetadatajson+ 12linked-datajson-schemaumlsemantic-webmetamodelschema-languagedata-integration+ 5

  Python

  •16•35•2•7•Updated Nov 22, 2024Nov 22, 2024

• linkml-map

  Public
  Mapping between LinkML schemas

  etlmappinglinkml+ 1data-model-mapping

  Python

  •2•19•1•3•Updated Nov 18, 2024Nov 18, 2024

• linkml-runtime

  Public
  Runtime support for linkml generated models

  conversionhacktoberfestobject-model+ 4instanceslinkmllinkml-runtimepython

  Python

  •

  Creative Commons Zero v1.0 Universal

  •24•26•1•18•Updated Nov 18, 2024Nov 18, 2024

• linkml-arrays-paper

  Public
  Perspective Paper on LinkML Arrays

  TeX

  •0•0•7•0•Updated Nov 14, 2024Nov 14, 2024

• linkml-project-cookiecutter

  Public
  A cookiecutter for linkml projects. An equivalent of `linkml-ws new project-name`.

  Python

  •

  Creative Commons Zero v1.0 Universal

  •18•18•19•10•Updated Oct 25, 2024Oct 25, 2024

• prefixmaps

  Public
  Semantic prefix map registry

  obofoundrybioregistrylinkml+ 1prefixmaps

  Python

  •

  Apache License 2.0

  •3•12•10•0•Updated Oct 17, 2024Oct 17, 2024

• linkml-arrays

  Public
  Support for loading and dumping N-dimensional arrays in LinkML.

  linked-datanumpyarrays+ 4multidimensional-arrayszarrlinkmlhdmf

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •1•5•7•3•Updated Sep 19, 2024Sep 19, 2024

• linkml-common

  Public
  ALPHA common modeling patterns

  schema-orgcommon-data-modellinkml

  Python

  •

  MIT License

  •0•5•0•0•Updated Sep 16, 2024Sep 16, 2024

• schemasheets

  Public
  Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats

  metadataschemasspreadsheets+ 6shexshaclfair-datalinkmlshape-languagessheets2linkml

  Python

  •5•42•23•0•Updated Sep 5, 2024Sep 5, 2024

• linkml-store

  Public
  wrapper for multiple linkml storage engines

  mongomongodbrdf+ 10data-lakehdf5nosql-databasetriplestoredatabase-wrapperdata-stacksemweb+ 3

  Python

  •

  MIT License

  •1•17•1•0•Updated Aug 24, 2024Aug 24, 2024

• schema-automator

  Public
  Automated assistance for the schema development lifecycle

  pythontoolsowl+ 8spreadsheetsdata-modelingschema-inferencecsvslinkmlincatoolsintelligent-concept-assistant+ 1

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •13•38•30•3•Updated Aug 19, 2024Aug 19, 2024

• linkml-tutorial

  Public
  tutoriallinkml

  Python

  •

  MIT License

  •1•6•0•0•Updated Aug 13, 2024Aug 13, 2024

• cmdr

  Public
  Python

  •

  MIT License

  •0•6•2•0•Updated Aug 6, 2024Aug 6, 2024

• linkml-schemaorg

  Public
  Automated linkml rendering of schema.org

  schema-orglinkml

  Makefile

  •

  MIT License

  •0•2•2•0•Updated Jul 24, 2024Jul 24, 2024

• linkml-tutorial-2024

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated Jul 9, 2024Jul 9, 2024

• linkml-renderer

  Public
  Rendering of instance data as HTML, Markdown, Mermaid

  pythonhtmlmarkdown+ 4templatesmermaidlinkmlinstance-graphs

  Python

  •

  Apache License 2.0

  •0•1•2•0•Updated Jun 26, 2024Jun 26, 2024

• linkml-solr

  Public
  Simple wrapper for using Solr with LinkML schemas

  metadatasolrlinkml

  Python

  •0•4•1•0•Updated Jun 4, 2024Jun 4, 2024

• linkml-owl

  Public
  Extension of LinkML runtime for converting instances of LinkML classes to OWL (classes or instances)

  templatesdesign-patternsowl+ 9ontologiesontology-generationontology-design-patternsmetaclasseslinkmljson2owlyaml2owl+ 2

  Python

  •1•11•11•0•Updated May 30, 2024May 30, 2024

• linkml-dataops

  Public
  Data API for LinkML instance data

  pythonapidatabase+ 4query-languagedata-modelinglinkmlchange-objects

  Python

  •1•4•1•0•Updated Feb 27, 2024Feb 27, 2024

• linkml-registry

  Public
  Registry of schemas that use LinkML

  registryschema-registryschemas+ 1linkml

  Python

  •4•12•6•0•Updated Feb 27, 2024Feb 27, 2024

• linkml-datalog

  Public
  Translates LinkML schemas into Datalog programs and executes them using Souffle, enabling advanced validation and inference over instance data. ALPHA.

  rulesvalidationrdf+ 9semanticssemantic-webconstraintsdataloglogic-programmingrule-languagereasoning+ 2

  Python

  •0•13•0•1•Updated Feb 14, 2024Feb 14, 2024

• linkml-validator

  Public archive
  [retired]

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•3•2•0•Updated Nov 21, 2023Nov 21, 2023

• linkml-runtime.js

  Public
  An implementation of the linkml-runtime in javascript ALPHA VERSION

  linkmldata-harmonizer

  TypeScript

  •3•7•3•0•Updated Jun 12, 2023Jun 12, 2023

• linkml.github.io

  Public
  Website/splash page for main LinkML project

  websitedata-modelingsplash-page+ 2linkmljekyll

  HTML

  •

  MIT License

  •3•1•0•0•Updated May 19, 2023May 19, 2023

• archived-linkml-model-template

  Public archive
  DEPRECATED! Please use linkml-project-cookiecutter instead.

  6•10•0•0•Updated May 12, 2023May 12, 2023

• semantic-dsl

  Public
  Easy Domain Specific Languages for your Schemas

  pythongrammarsrdf+ 4larksemweblinkmlgrammar-generator

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•4•0•0•Updated Mar 31, 2023Mar 31, 2023

• semantic-variable-registry

  Public
  ALPHA universal registry of semantic variables

  Python

  •0•0•1•0•Updated Mar 6, 2023Mar 6, 2023

• .github

  Public
  1•0•0•0•Updated Jan 14, 2023Jan 14, 2023

• linkml-project-template

  Public archive
  A template for LinkML projects using poetry and gen-project

  linkmllinkml-model-template

  Jinja

  •

  MIT License

  •2•9•13•1•Updated Sep 16, 2022Sep 16, 2022