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lib/deploy: Log SELinux policy refresh
I have a suspicion that the `semodule -N --refresh` we do here is involved in coreos/fedora-coreos-tracker#1597. Let's log when we execute it and include its time. While we're here, also log the time it takes to `syncfs()` and the fsfreeze/thaw cycling. It's logged in a structured journal entry, but that's less accessible than just having it in the journal message field.
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