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1. EDTA EDTA Public

   Extensive de-novo TE Annotator

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2. LTR_retriever LTR_retriever Public

   LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package.

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3. LTR_FINDER_parallel LTR_FINDER_parallel Public

   A parallel wrapper for LTR_FINDER

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4. MTEC MTEC Public

   A repo contains historical and updated MTEC libraries.

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5. ThetaPi ThetaPi Public

   Nucleotide diversity estimation using population SNP data

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6. PopTEvo PopTEvo Public

   Study of TE evolution in a population of genomes

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