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pafonta/README.md

I build scalable AI solutions to uncover insights from scientific texts with precision.

Welcome 👋

10 years' experience and a growth mindset.

Love to build upon state-of-the-art research and cutting-edge Python technologies with inventive people.

Expert in building scalable AI solutions, from the vision to the algorithms by way of the architecture.

Specialized in making fast and easy to access and analyze knowledge hidden in large collections of text documents.

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  1. pubmed_statistics.py pubmed_statistics.py
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    # For an example of use, see https://gist.github.com/pafonta/37762f56e8c1879569bca64901d0a000#gistcomment-3968062.
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    """Collect statistics on PubMed articles."""
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    from __future__ import annotations
  2. nlm_mesh.py nlm_mesh.py
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    # For an example of use, see https://gist.github.com/pafonta/162c1b9ec0380e95a017297a707a4d66#gistcomment-3935739.
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    """Find & Rank MeSH terms associated with an author."""
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    from __future__ import annotations
  3. nlm_mesh_tree.py nlm_mesh_tree.py
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    # For an example of use, see https://gist.github.com/pafonta/d33a0d5d849932f8ceab8b711d995497#gistcomment-3965575.
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    """Find MeSH terms in the MeSH tree simply (i.e. without using a graph)."""
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    from __future__ import annotations
  4. entity_linking.py entity_linking.py
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    # For an example of use, see https://gist.github.com/pafonta/21f3db4d9c31f6a1c2f7ede8cbf3406b#gistcomment-3970844.
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    """Entity Linking - Link mentions from texts to terms in ontologies.
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    Use character-based embedding to handle plurals, misspellings, partial matches, ...
  5. r-lunch-10-04-18 r-lunch-10-04-18 Public

    Data Wrangling with dplyr and tidyr - An introduction -- R Lunch 10.04.18 @ UniGe

    Jupyter Notebook 1