add apply func #99 + two fixes #418
Workflow file for this run
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| name: pastastore | |
| on: | |
| # Trigger the workflow on push or pull request on master, | |
| # and only on pull-requests on dev branch | |
| push: | |
| branches: | |
| - master | |
| - dev | |
| pull_request: | |
| branches: | |
| - master | |
| - dev | |
| jobs: | |
| lint: | |
| name: Lint | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v3 | |
| - name: Setup Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.9 | |
| cache: "pip" | |
| cache-dependency-path: pyproject.toml | |
| - name: Install Python dependencies | |
| run: | | |
| pip install . | |
| pip install ".[lint]" | |
| - name: Run black | |
| uses: psf/black@stable | |
| with: | |
| options: "--check --diff" | |
| jupyter: true | |
| - name: Run isort | |
| run: | | |
| isort --check --diff --profile=black ./pastastore | |
| - name: Run flake8 | |
| run: | | |
| flake8 --count --show-source --exit-zero --max-line-length=88 ./pastastore | |
| flake8 --count --exit-zero --max-line-length=88 --statistics ./pastastore | |
| test: | |
| name: Tests | |
| needs: lint | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10", "3.11"] | |
| pastas-version: | |
| [ | |
| "git+https://github.com/pastas/[email protected]", | |
| "git+https://github.com/pastas/[email protected]", | |
| "git+https://github.com/pastas/[email protected]", | |
| "git+https://github.com/pastas/pastas.git@dev", | |
| ] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: "pip" | |
| cache-dependency-path: pyproject.toml | |
| - name: Install dependencies | |
| run: | | |
| pip install --upgrade pip | |
| pip install ${{ matrix.pastas-version }} | |
| pip install -e .[test] | |
| - name: Run pytest | |
| run: | | |
| pytest -m "not bgmap" | |
| - name: Test backgroundmap once | |
| if: ${{ matrix.python-version == '3.9' && matrix.pastas-version == 'git+https://github.com/pastas/pastas.git@dev' }} | |
| run: | | |
| pytest -m "bgmap" | |
| - name: Run codacy-coverage-reporter | |
| if: ${{ github.repository == 'pastas/pastastore' && success() }} | |
| uses: codacy/codacy-coverage-reporter-action@master | |
| with: | |
| project-token: ${{ secrets.CODACY_PROJECT_TOKEN }} | |
| coverage-reports: coverage.xml |