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updated main script
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allucas authored Oct 23, 2023
1 parent 9d0fe5a commit 8c982ef
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion python/ieeg_recon.py
Original file line number Diff line number Diff line change
Expand Up @@ -110,7 +110,7 @@ def run_module2(args):

if args.deface_outputs:
print("Defacing outputs...")
subprocess.call(["python","pipeline/deface_outputs.py","-s", args.subject, "-d", args.source_directory])
subprocess.call(["python","pipeline/module2_deface_outputs.py","-s", args.subject, "-d", args.source_directory])

if args.brain_shift:
print("Applying brain shift correction to module 2 outputs...")
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