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phasorpy · Jun 2, 2024 · 71d7880 · 71d7880
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diff --git a/main/_downloads/315c4c52fb68082a731b192d944e2ede/tutorials_python.zip b/main/_downloads/315c4c52fb68082a731b192d944e2ede/tutorials_python.zip
diff --git a/main/_downloads/a5659940aa3f8f568547d47752a43172/tutorials_jupyter.zip b/main/_downloads/a5659940aa3f8f568547d47752a43172/tutorials_jupyter.zip
diff --git a/main/_images/sphx_glr_phasorpy_components_002.png b/main/_images/sphx_glr_phasorpy_components_002.png
diff --git a/main/_images/sphx_glr_phasorpy_components_003.png b/main/_images/sphx_glr_phasorpy_components_003.png
diff --git a/main/_images/sphx_glr_phasorpy_components_thumb.png b/main/_images/sphx_glr_phasorpy_components_thumb.png
diff --git a/main/_images/sphx_glr_phasorpy_phasor_from_lifetime_005.png b/main/_images/sphx_glr_phasorpy_phasor_from_lifetime_005.png
diff --git a/main/_images/sphx_glr_phasorpy_phasorplot_007.png b/main/_images/sphx_glr_phasorpy_phasorplot_007.png
diff --git a/main/_images/sphx_glr_phasorpy_phasorplot_008.png b/main/_images/sphx_glr_phasorpy_phasorplot_008.png
diff --git a/main/_images/sphx_glr_phasorpy_phasorplot_010.png b/main/_images/sphx_glr_phasorpy_phasorplot_010.png
diff --git a/main/_images/sphx_glr_phasorpy_phasorplot_012.png b/main/_images/sphx_glr_phasorpy_phasorplot_012.png
diff --git a/main/_images/sphx_glr_phasorpy_phasorplot_013.png b/main/_images/sphx_glr_phasorpy_phasorplot_013.png
diff --git a/main/_images/sphx_glr_phasorpy_phasorplot_thumb.png b/main/_images/sphx_glr_phasorpy_phasorplot_thumb.png
diff --git a/main/_sources/sg_execution_times.rst.txt b/main/_sources/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:25.607** total execution time for 7 files **from all galleries**:
+**00:26.062** total execution time for 7 files **from all galleries**:
 
 .. container::
 
@@ -33,22 +33,22 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_tutorials_benchmarks_phasorpy_phasor_from_signal.py` (``../tutorials/benchmarks/phasorpy_phasor_from_signal.py``)
-     - 00:13.121
+     - 00:13.008
      - 0.0
    * - :ref:`sphx_glr_tutorials_phasorpy_introduction.py` (``../tutorials/phasorpy_introduction.py``)
-     - 00:08.244
+     - 00:08.832
      - 0.0
    * - :ref:`sphx_glr_tutorials_phasorpy_fret.py` (``../tutorials/phasorpy_fret.py``)
-     - 00:02.231
+     - 00:02.220
      - 0.0
    * - :ref:`sphx_glr_tutorials_phasorpy_phasorplot.py` (``../tutorials/phasorpy_phasorplot.py``)
-     - 00:00.887
+     - 00:00.882
      - 0.0
    * - :ref:`sphx_glr_tutorials_phasorpy_phasor_from_lifetime.py` (``../tutorials/phasorpy_phasor_from_lifetime.py``)
-     - 00:00.599
+     - 00:00.595
      - 0.0
    * - :ref:`sphx_glr_tutorials_phasorpy_components.py` (``../tutorials/phasorpy_components.py``)
-     - 00:00.463
+     - 00:00.462
      - 0.0
    * - :ref:`sphx_glr_tutorials_misc_phasorpy_logo.py` (``../tutorials/misc/phasorpy_logo.py``)
      - 00:00.062

diff --git a/main/_sources/tutorials/benchmarks/phasorpy_phasor_from_signal.rst.txt b/main/_sources/tutorials/benchmarks/phasorpy_phasor_from_signal.rst.txt
@@ -149,34 +149,34 @@ and number of threads:
       axis -1
         phasor_from_signal       0.056s   1.00
           threads 2              0.031s   0.55
-        phasor_from_signal_fft   0.388s   6.95
-          scipy_fft              0.398s   7.13
+        phasor_from_signal_fft   0.385s   6.91
+          scipy_fft              0.392s   7.02
       axis 0
         phasor_from_signal       0.164s   2.93
           threads 2              0.081s   1.45
-        phasor_from_signal_fft   2.428s  43.49
-          scipy_fft              0.481s   8.61
+        phasor_from_signal_fft   2.398s  42.96
+          scipy_fft              0.474s   8.48
       axis 2
         phasor_from_signal       0.056s   1.00
           threads 2              0.030s   0.54
-        phasor_from_signal_fft   0.387s   6.93
-          scipy_fft              0.399s   7.15
+        phasor_from_signal_fft   0.387s   6.94
+          scipy_fft              0.392s   7.03
     harmonics 8
       axis -1
-        phasor_from_signal       0.451s   8.09
-          threads 2              0.234s   4.19
-        phasor_from_signal_fft   0.402s   7.20
-          scipy_fft              0.410s   7.35
+        phasor_from_signal       0.446s   8.00
+          threads 2              0.237s   4.25
+        phasor_from_signal_fft   0.399s   7.16
+          scipy_fft              0.405s   7.26
       axis 0
-        phasor_from_signal       1.309s  23.45
-          threads 2              0.661s  11.84
-        phasor_from_signal_fft   2.442s  43.75
-          scipy_fft              0.491s   8.79
+        phasor_from_signal       1.311s  23.48
+          threads 2              0.664s  11.90
+        phasor_from_signal_fft   2.404s  43.07
+          scipy_fft              0.477s   8.55
       axis 2
-        phasor_from_signal       0.445s   7.97
+        phasor_from_signal       0.452s   8.10
           threads 2              0.234s   4.19
-        phasor_from_signal_fft   0.401s   7.18
-          scipy_fft              0.413s   7.40
+        phasor_from_signal_fft   0.396s   7.09
+          scipy_fft              0.403s   7.23
 
 
 
@@ -255,7 +255,7 @@ when computing large number of harmonics with an optimized FFT function.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 13.121 seconds)
+   **Total running time of the script:** (0 minutes 13.008 seconds)
 
 
 .. _sphx_glr_download_tutorials_benchmarks_phasorpy_phasor_from_signal.py:

diff --git a/main/_sources/tutorials/benchmarks/sg_execution_times.rst.txt b/main/_sources/tutorials/benchmarks/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:13.121** total execution time for 1 file **from tutorials/benchmarks**:
+**00:13.008** total execution time for 1 file **from tutorials/benchmarks**:
 
 .. container::
 
@@ -33,5 +33,5 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_tutorials_benchmarks_phasorpy_phasor_from_signal.py` (``phasorpy_phasor_from_signal.py``)
-     - 00:13.121
+     - 00:13.008
      - 0.0
diff --git a/main/_sources/tutorials/phasorpy_components.rst.txt b/main/_sources/tutorials/phasorpy_components.rst.txt
@@ -211,7 +211,7 @@ sphinx_gallery_thumbnail_number = 2
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.463 seconds)
+   **Total running time of the script:** (0 minutes 0.462 seconds)
 
 
 .. _sphx_glr_download_tutorials_phasorpy_components.py:

diff --git a/main/_sources/tutorials/phasorpy_fret.rst.txt b/main/_sources/tutorials/phasorpy_fret.rst.txt
@@ -407,7 +407,7 @@ mypy: disable-error-code="arg-type"
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 2.231 seconds)
+   **Total running time of the script:** (0 minutes 2.220 seconds)
 
 
 .. _sphx_glr_download_tutorials_phasorpy_fret.py:

diff --git a/main/_sources/tutorials/phasorpy_introduction.rst.txt b/main/_sources/tutorials/phasorpy_introduction.rst.txt
@@ -448,7 +448,7 @@ sphinx_gallery_thumbnail_number = 3
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 8.244 seconds)
+   **Total running time of the script:** (0 minutes 8.832 seconds)
 
 
 .. _sphx_glr_download_tutorials_phasorpy_introduction.py:

diff --git a/main/_sources/tutorials/phasorpy_phasor_from_lifetime.rst.txt b/main/_sources/tutorials/phasorpy_phasor_from_lifetime.rst.txt
@@ -358,7 +358,7 @@ sphinx_gallery_thumbnail_number = -2
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.599 seconds)
+   **Total running time of the script:** (0 minutes 0.595 seconds)
 
 
 .. _sphx_glr_download_tutorials_phasorpy_phasor_from_lifetime.py:

diff --git a/main/_sources/tutorials/phasorpy_phasorplot.rst.txt b/main/_sources/tutorials/phasorpy_phasorplot.rst.txt
@@ -461,7 +461,7 @@ sphinx_gallery_thumbnail_number = 10
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.887 seconds)
+   **Total running time of the script:** (0 minutes 0.882 seconds)
 
 
 .. _sphx_glr_download_tutorials_phasorpy_phasorplot.py:

diff --git a/main/_sources/tutorials/sg_execution_times.rst.txt b/main/_sources/tutorials/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:12.424** total execution time for 5 files **from tutorials**:
+**00:12.992** total execution time for 5 files **from tutorials**:
 
 .. container::
 
@@ -33,17 +33,17 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_tutorials_phasorpy_introduction.py` (``phasorpy_introduction.py``)
-     - 00:08.244
+     - 00:08.832
      - 0.0
    * - :ref:`sphx_glr_tutorials_phasorpy_fret.py` (``phasorpy_fret.py``)
-     - 00:02.231
+     - 00:02.220
      - 0.0
    * - :ref:`sphx_glr_tutorials_phasorpy_phasorplot.py` (``phasorpy_phasorplot.py``)
-     - 00:00.887
+     - 00:00.882
      - 0.0
    * - :ref:`sphx_glr_tutorials_phasorpy_phasor_from_lifetime.py` (``phasorpy_phasor_from_lifetime.py``)
-     - 00:00.599
+     - 00:00.595
      - 0.0
    * - :ref:`sphx_glr_tutorials_phasorpy_components.py` (``phasorpy_components.py``)
-     - 00:00.463
+     - 00:00.462
      - 0.0
diff --git a/main/searchindex.js b/main/searchindex.js
diff --git a/main/sg_execution_times.html b/main/sg_execution_times.html
@@ -454,7 +454,7 @@
 
   <section id="computation-times">
 <span id="sphx-glr-sg-execution-times"></span><h1>Computation times<a class="headerlink" href="#computation-times" title="Link to this heading">#</a></h1>
-<p><strong>00:25.607</strong> total execution time for 7 files <strong>from all galleries</strong>:</p>
+<p><strong>00:26.062</strong> total execution time for 7 files <strong>from all galleries</strong>:</p>
 <div class="docutils container">
 <style scoped>
 <link href="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/5.3.0/css/bootstrap.min.css" rel="stylesheet" />
@@ -476,27 +476,27 @@
 </thead>
 <tbody>
 <tr class="row-even"><td><p><a class="reference internal" href="tutorials/benchmarks/phasorpy_phasor_from_signal.html#sphx-glr-tutorials-benchmarks-phasorpy-phasor-from-signal-py"><span class="std std-ref">Benchmark phasor_from_signal</span></a> (<code class="docutils literal notranslate"><span class="pre">../tutorials/benchmarks/phasorpy_phasor_from_signal.py</span></code>)</p></td>
-<td><p>00:13.121</p></td>
+<td><p>00:13.008</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-odd"><td><p><a class="reference internal" href="tutorials/phasorpy_introduction.html#sphx-glr-tutorials-phasorpy-introduction-py"><span class="std std-ref">Introduction to PhasorPy</span></a> (<code class="docutils literal notranslate"><span class="pre">../tutorials/phasorpy_introduction.py</span></code>)</p></td>
-<td><p>00:08.244</p></td>
+<td><p>00:08.832</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="tutorials/phasorpy_fret.html#sphx-glr-tutorials-phasorpy-fret-py"><span class="std std-ref">Förster Resonance Energy Transfer</span></a> (<code class="docutils literal notranslate"><span class="pre">../tutorials/phasorpy_fret.py</span></code>)</p></td>
-<td><p>00:02.231</p></td>
+<td><p>00:02.220</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-odd"><td><p><a class="reference internal" href="tutorials/phasorpy_phasorplot.html#sphx-glr-tutorials-phasorpy-phasorplot-py"><span class="std std-ref">Phasor plot</span></a> (<code class="docutils literal notranslate"><span class="pre">../tutorials/phasorpy_phasorplot.py</span></code>)</p></td>
-<td><p>00:00.887</p></td>
+<td><p>00:00.882</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="tutorials/phasorpy_phasor_from_lifetime.html#sphx-glr-tutorials-phasorpy-phasor-from-lifetime-py"><span class="std std-ref">Phasor coordinates from lifetimes</span></a> (<code class="docutils literal notranslate"><span class="pre">../tutorials/phasorpy_phasor_from_lifetime.py</span></code>)</p></td>
-<td><p>00:00.599</p></td>
+<td><p>00:00.595</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-odd"><td><p><a class="reference internal" href="tutorials/phasorpy_components.html#sphx-glr-tutorials-phasorpy-components-py"><span class="std std-ref">Component analysis</span></a> (<code class="docutils literal notranslate"><span class="pre">../tutorials/phasorpy_components.py</span></code>)</p></td>
-<td><p>00:00.463</p></td>
+<td><p>00:00.462</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="tutorials/misc/phasorpy_logo.html#sphx-glr-tutorials-misc-phasorpy-logo-py"><span class="std std-ref">PhasorPy logo</span></a> (<code class="docutils literal notranslate"><span class="pre">../tutorials/misc/phasorpy_logo.py</span></code>)</p></td>

diff --git a/main/tutorials/benchmarks/phasorpy_phasor_from_signal.html b/main/tutorials/benchmarks/phasorpy_phasor_from_signal.html
@@ -573,34 +573,34 @@ <h2>Run benchmark<a class="headerlink" href="#run-benchmark" title="Link to this
   axis -1
     phasor_from_signal       0.056s   1.00
       threads 2              0.031s   0.55
-    phasor_from_signal_fft   0.388s   6.95
-      scipy_fft              0.398s   7.13
+    phasor_from_signal_fft   0.385s   6.91
+      scipy_fft              0.392s   7.02
   axis 0
     phasor_from_signal       0.164s   2.93
       threads 2              0.081s   1.45
-    phasor_from_signal_fft   2.428s  43.49
-      scipy_fft              0.481s   8.61
+    phasor_from_signal_fft   2.398s  42.96
+      scipy_fft              0.474s   8.48
   axis 2
     phasor_from_signal       0.056s   1.00
       threads 2              0.030s   0.54
-    phasor_from_signal_fft   0.387s   6.93
-      scipy_fft              0.399s   7.15
+    phasor_from_signal_fft   0.387s   6.94
+      scipy_fft              0.392s   7.03
 harmonics 8
   axis -1
-    phasor_from_signal       0.451s   8.09
-      threads 2              0.234s   4.19
-    phasor_from_signal_fft   0.402s   7.20
-      scipy_fft              0.410s   7.35
+    phasor_from_signal       0.446s   8.00
+      threads 2              0.237s   4.25
+    phasor_from_signal_fft   0.399s   7.16
+      scipy_fft              0.405s   7.26
   axis 0
-    phasor_from_signal       1.309s  23.45
-      threads 2              0.661s  11.84
-    phasor_from_signal_fft   2.442s  43.75
-      scipy_fft              0.491s   8.79
+    phasor_from_signal       1.311s  23.48
+      threads 2              0.664s  11.90
+    phasor_from_signal_fft   2.404s  43.07
+      scipy_fft              0.477s   8.55
   axis 2
-    phasor_from_signal       0.445s   7.97
+    phasor_from_signal       0.452s   8.10
       threads 2              0.234s   4.19
-    phasor_from_signal_fft   0.401s   7.18
-      scipy_fft              0.413s   7.40
+    phasor_from_signal_fft   0.396s   7.09
+      scipy_fft              0.403s   7.23
 </pre></div>
 </div>
 <p>For reference, the results on a Core i7-14700K CPU:</p>
@@ -667,7 +667,7 @@ <h2>Conclusions<a class="headerlink" href="#conclusions" title="Link to this hea
 <p>The <code class="docutils literal notranslate"><span class="pre">phasor_from_signal</span></code> implementation is a reasonable default.
 The <code class="docutils literal notranslate"><span class="pre">phasor_from_signal_fft</span></code> function may be a better choice, for example,
 when computing large number of harmonics with an optimized FFT function.</p>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 13.121 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 13.008 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-tutorials-benchmarks-phasorpy-phasor-from-signal-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../../_downloads/9d07845b628b555914639d30910d46da/phasorpy_phasor_from_signal.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">phasorpy_phasor_from_signal.ipynb</span></code></a></p>

diff --git a/main/tutorials/benchmarks/sg_execution_times.html b/main/tutorials/benchmarks/sg_execution_times.html
@@ -454,7 +454,7 @@
 
   <section id="computation-times">
 <span id="sphx-glr-tutorials-benchmarks-sg-execution-times"></span><h1>Computation times<a class="headerlink" href="#computation-times" title="Link to this heading">#</a></h1>
-<p><strong>00:13.121</strong> total execution time for 1 file <strong>from tutorials/benchmarks</strong>:</p>
+<p><strong>00:13.008</strong> total execution time for 1 file <strong>from tutorials/benchmarks</strong>:</p>
 <div class="docutils container">
 <style scoped>
 <link href="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/5.3.0/css/bootstrap.min.css" rel="stylesheet" />
@@ -476,7 +476,7 @@
 </thead>
 <tbody>
 <tr class="row-even"><td><p><a class="reference internal" href="phasorpy_phasor_from_signal.html#sphx-glr-tutorials-benchmarks-phasorpy-phasor-from-signal-py"><span class="std std-ref">Benchmark phasor_from_signal</span></a> (<code class="docutils literal notranslate"><span class="pre">phasorpy_phasor_from_signal.py</span></code>)</p></td>
-<td><p>00:13.121</p></td>
+<td><p>00:13.008</p></td>
 <td><p>0.0</p></td>
 </tr>
 </tbody>

diff --git a/main/tutorials/phasorpy_components.html b/main/tutorials/phasorpy_components.html
@@ -581,7 +581,7 @@ <h2>Contribution of two known components in multiple phasors<a class="headerlink
 </pre></div>
 </div>
 <img src="../_images/sphx_glr_phasorpy_components_003.png" srcset="../_images/sphx_glr_phasorpy_components_003.png" alt="Histograms of fractions of first and second component" class = "sphx-glr-single-img"/><p>sphinx_gallery_thumbnail_number = 2</p>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.463 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.462 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-tutorials-phasorpy-components-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../_downloads/ccecd4264e0158187b962766cb9fbe11/phasorpy_components.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">phasorpy_components.ipynb</span></code></a></p>

diff --git a/main/tutorials/phasorpy_fret.html b/main/tutorials/phasorpy_fret.html
@@ -694,7 +694,7 @@ <h2>Multi-frequency plot<a class="headerlink" href="#multi-frequency-plot" title
 </div>
 <img src="../_images/sphx_glr_phasorpy_fret_008.png" srcset="../_images/sphx_glr_phasorpy_fret_008.png" alt="Acceptor channel" class = "sphx-glr-single-img"/><p>sphinx_gallery_thumbnail_number = 5
 mypy: disable-error-code=”arg-type”</p>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 2.231 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 2.220 seconds)</p>
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diff --git a/main/tutorials/phasorpy_introduction.html b/main/tutorials/phasorpy_introduction.html
@@ -685,7 +685,7 @@ <h2>Appendix<a class="headerlink" href="#appendix" title="Link to this heading">
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diff --git a/main/tutorials/phasorpy_phasor_from_lifetime.html b/main/tutorials/phasorpy_phasor_from_lifetime.html
@@ -668,7 +668,7 @@ <h2>Multi-frequency plot<a class="headerlink" href="#multi-frequency-plot" title
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diff --git a/main/tutorials/phasorpy_phasorplot.html b/main/tutorials/phasorpy_phasorplot.html
@@ -654,7 +654,7 @@ <h2>plot_phasor function<a class="headerlink" href="#plot-phasor-function" title
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