explicitly recalculate delta when applying a calculated value #673
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| name: Build and Test | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| types: [opened, synchronize, reopened] | |
| branches-ignore: | |
| - '!l10n_master' | |
| jobs: | |
| build: | |
| name: Build and Test | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 # Shallow clones should be disabled for a better relevancy of analysis | |
| - name: Set up JDK 11 | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get -q -y install default-jdk | |
| # apt-get -q -y install libservlet3.1-java tomcat9 | |
| # uses: actions/setup-java@v1 | |
| # with: | |
| # java-version: 11 | |
| - name: Set up Maven | |
| uses: stCarolas/[email protected] | |
| with: | |
| maven-version: 3.8.7 | |
| - name: Cache Maven packages | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.m2 | |
| key: ${{ runner.os }}-m2-${{ hashFiles('**/pom.xml') }} | |
| restore-keys: ${{ runner.os }}-m2 | |
| - name: Build | |
| run: | | |
| VERSION=$(grep -oP '<application.version>\K[^<]+' /home/runner/work/ctsms/ctsms/pom.xml) | |
| echo "VERSION=$VERSION" >> $GITHUB_ENV | |
| COMMIT=$(git log --format=%B -n 1 "$GITHUB_SHA") | |
| COMMIT_MESSAGE_REGEX="[Mm]erge [a-zA-Z0-9]+ into [a-zA-Z0-9]+" | |
| if [[ $COMMIT =~ $COMMIT_MESSAGE_REGEX ]]; | |
| then | |
| COMMIT=$(echo "$COMMIT" | sed -e 's/[Mm]erge \([a-zA-Z0-9]\+\) into [a-zA-Z0-9]\+/\1/' | cut -c 1-7) | |
| else | |
| COMMIT=$(git rev-parse --short HEAD) | |
| fi | |
| echo "COMMIT=$COMMIT" >> $GITHUB_ENV | |
| sed -r -i "s/<application.version>([^<]+)<\/application.version>/<application.version>\1 [$COMMIT]<\/application.version>/" /home/runner/work/ctsms/ctsms/pom.xml | |
| UUID="test-" | |
| UUID+=$(cat /proc/sys/kernel/random/uuid) | |
| sed -r -i "s/<application.uuid><\/application.uuid>/<application.uuid>$UUID<\/application.uuid>/" /home/runner/work/ctsms/ctsms/pom.xml | |
| mvn install -DskipTests --no-transfer-progress | |
| - name: Setup database | |
| run: | | |
| sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/setup_database.sh | |
| /home/runner/work/ctsms/ctsms/.github/workflows/setup_database.sh | |
| - name: Download master data | |
| run: | | |
| sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/download_masterdata.sh | |
| sudo /home/runner/work/ctsms/ctsms/.github/workflows/download_masterdata.sh | |
| echo "CTSMS_PROPERTIES=/ctsms/properties" >> $GITHUB_ENV | |
| echo "CTSMS_JAVA=/ctsms/java" >> $GITHUB_ENV | |
| - name: Setup BulkProcessor | |
| run: | | |
| sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/setup_bulkprocessor.sh | |
| sudo -E /home/runner/work/ctsms/ctsms/.github/workflows/setup_bulkprocessor.sh | |
| - name: Setup dbtool.sh | |
| env: | |
| MAIL_SENDER_HOST: ${{ secrets.MAIL_SENDER_HOST }} | |
| MAIL_SENDER_PORT: ${{ secrets.MAIL_SENDER_PORT }} | |
| MAIL_SENDER_PROTOCOL: ${{ secrets.MAIL_SENDER_PROTOCOL }} | |
| MAIL_SENDER_USERNAME: ${{ secrets.MAIL_SENDER_USERNAME }} | |
| MAIL_SENDER_PASSWORD: ${{ secrets.MAIL_SENDER_PASSWORD }} | |
| MAIL_SENDER_AUTH: ${{ secrets.MAIL_SENDER_AUTH }} | |
| MAIL_SENDER_STARTTLS: ${{ secrets.MAIL_SENDER_STARTTLS }} | |
| MAIL_SENDER_ADDRESS: ${{ secrets.MAIL_SENDER_ADDRESS }} | |
| run: | | |
| sudo echo "email_exec_from_address=$MAIL_SENDER_ADDRESS" >> /ctsms/properties/ctsms-settings.properties | |
| sudo echo "email_exec_from_name=Phoenix CTMS Automated Tests" >> /ctsms/properties/ctsms-settings.properties | |
| sudo echo "job_mail_sender_host=$MAIL_SENDER_HOST" >> /ctsms/properties/ctsms-applicationcontext.properties | |
| sudo echo "job_mail_sender_port=$MAIL_SENDER_PORT" >> /ctsms/properties/ctsms-applicationcontext.properties | |
| sudo echo "job_mail_sender_protocol=$MAIL_SENDER_PROTOCOL" >> /ctsms/properties/ctsms-applicationcontext.properties | |
| sudo echo "job_mail_sender_username=$MAIL_SENDER_USERNAME" >> /ctsms/properties/ctsms-applicationcontext.properties | |
| sudo echo "job_mail_sender_password=$MAIL_SENDER_PASSWORD" >> /ctsms/properties/ctsms-applicationcontext.properties | |
| sudo touch /ctsms/properties/ctsms-job-mail-sender.properties | |
| sudo chown ctsms:ctsms /ctsms/properties/ctsms-job-mail-sender.properties | |
| sudo chmod 777 /ctsms/properties/ctsms-job-mail-sender.properties | |
| sudo echo "mail.smtp.auth=$MAIL_SENDER_AUTH" >> /ctsms/properties/ctsms-job-mail-sender.properties | |
| sudo echo "mail.smtp.starttls.enable=$MAIL_SENDER_STARTTLS" >> /ctsms/properties/ctsms-job-mail-sender.properties | |
| sudo chown ctsms:ctsms /home/runner/work/ctsms/ctsms/.github/workflows/dbtool.sh | |
| sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/dbtool.sh | |
| sudo mv /home/runner/work/ctsms/ctsms/.github/workflows/dbtool.sh /ctsms/dbtool.sh | |
| sudo chmod 777 /home | |
| sudo chmod 777 /home/runner | |
| sudo chmod 777 /home/runner/work | |
| sudo chmod 777 /home/runner/work/ctsms | |
| sudo chmod 777 /home/runner/work/ctsms/ctsms/web -R | |
| - name: Initialize DB | |
| run: | | |
| sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/init_database.sh | |
| /home/runner/work/ctsms/ctsms/.github/workflows/init_database.sh | |
| - name: Setup Tomcat | |
| run: | | |
| sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/setup_tomcat.sh | |
| sudo -E /home/runner/work/ctsms/ctsms/.github/workflows/setup_tomcat.sh | |
| - name: Setup ChromeDriver | |
| run: | | |
| sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/setup_selenium.sh | |
| sudo /home/runner/work/ctsms/ctsms/.github/workflows/setup_selenium.sh | |
| sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/run_selenium_test.sh | |
| sudo apt-get -q -y install wkhtmltopdf | |
| # xvfb-run java -Dwebdriver.chrome.driver=/usr/bin/chromedriver -jar selenium-server-standalone-4.4.0.jar 2>&1 & | |
| # sleep 5 | |
| - name: Load demo data | |
| run: | | |
| /ctsms/dbtool.sh -ldd -f | |
| - name: Run tests | |
| env: | |
| FTP_HOST: ${{ secrets.FTP_HOST }} | |
| FTP_USERNAME: ${{ secrets.FTP_USERNAME }} | |
| FTP_PASSWORD: ${{ secrets.FTP_PASSWORD }} | |
| FTP_PATH: ${{ secrets.FTP_PATH }} | |
| run: | | |
| /home/runner/work/ctsms/ctsms/.github/workflows/run_selenium_test.sh org.phoenixctms.ctsms.selenium.proband.* "Proband Tests" [email protected] | |
| /home/runner/work/ctsms/ctsms/.github/workflows/run_selenium_test.sh org.phoenixctms.ctsms.selenium.trial.* "Trial Tests" [email protected] | |
| # - name: test perl selenium remote | |
| # run: | | |
| # perl /home/runner/work/ctsms/ctsms/.github/workflows/seleniumtest.pl |