For REMIND AMTs: start compareScenarios as slurm job and not on login node #137
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| name: check | |
| on: | |
| push: | |
| branches: [main, master] | |
| pull_request: | |
| branches: [main, master] | |
| jobs: | |
| check: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| extra-repositories: "https://rse.pik-potsdam.de/r/packages" | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: | | |
| gamstransfer=?ignore | |
| any::lucode2 | |
| any::covr | |
| any::madrat | |
| any::magclass | |
| any::citation | |
| any::gms | |
| any::goxygen | |
| any::GDPuc | |
| # piam packages also available on CRAN (madrat, magclass, citation, | |
| # gms, goxygen, GDPuc) will usually have an outdated binary version | |
| # available; by using extra-packages we get the newest version | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.9 | |
| - name: Install python dependencies if applicable | |
| run: | | |
| [ -f requirements.txt ] && python -m pip install --upgrade pip wheel || true | |
| [ -f requirements.txt ] && pip install -r requirements.txt || true | |
| - name: Verify validation key | |
| shell: Rscript {0} | |
| run: lucode2:::validkey(stopIfInvalid = TRUE) | |
| - name: Checks | |
| shell: Rscript {0} | |
| run: | | |
| options(crayon.enabled = TRUE) | |
| lucode2::check(runLinter = FALSE) | |
| - name: Test coverage | |
| shell: Rscript {0} | |
| run: | | |
| nonDummyTests <- setdiff(list.files("./tests/testthat/"), c("test-dummy.R", "_snaps")) | |
| if(length(nonDummyTests) > 0) covr::codecov(quiet = FALSE) | |
| env: | |
| NOT_CRAN: "true" |