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shorten REMIND AMT slurm runtime #118

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Sep 17, 2024
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2 changes: 1 addition & 1 deletion .buildlibrary
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
ValidationKey: '42272800'
ValidationKey: '42381822'
AcceptedWarnings:
- 'Warning: package ''.*'' was built under R version'
- 'Warning: namespace ''.*'' is not available and has been replaced'
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2 changes: 1 addition & 1 deletion .pre-commit-config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@ repos:
- id: mixed-line-ending

- repo: https://github.com/lorenzwalthert/precommit
rev: 7910e0323d7213f34275a7a562b9ef0fde8ce1b9 # frozen: v0.4.2
rev: bae853d82da476eee0e0a57960ee6b741a3b3fb7 # frozen: v0.4.3
hooks:
- id: parsable-R
- id: deps-in-desc
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4 changes: 2 additions & 2 deletions CITATION.cff
Original file line number Diff line number Diff line change
Expand Up @@ -2,8 +2,8 @@ cff-version: 1.2.0
message: If you use this software, please cite it using the metadata from this file.
type: software
title: 'modelstats: Run Analysis Tools'
version: 0.21.20
date-released: '2024-08-05'
version: 0.21.21
date-released: '2024-09-16'
abstract: A collection of tools to analyze model runs.
authors:
- family-names: Giannousakis
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4 changes: 2 additions & 2 deletions DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
Package: modelstats
Type: Package
Title: Run Analysis Tools
Version: 0.21.20
Date: 2024-08-05
Version: 0.21.21
Date: 2024-09-16
Authors@R: c(
person("Anastasis", "Giannousakis", email = "[email protected]", role = c("aut","cre")),
person("Oliver", "Richters", role = "aut")
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4 changes: 2 additions & 2 deletions R/modeltests.R
Original file line number Diff line number Diff line change
Expand Up @@ -115,15 +115,15 @@ startRuns <- function(test, model, mydir, user) {
if (model == "REMIND") {
message("Configuring and starting single testOneRegi-AMT")
system(paste("Rscript start.R --testOneRegi titletag=AMT",
"slurmConfig=\"--qos=priority --nodes=1 --tasks-per-node=1 --wait\""))
"slurmConfig=\"--qos=priority --nodes=1 --tasks-per-node=1 --wait --time=2:00:00\""))

message("Configuring and starting bundle of AMT runs")
# do not download input data every run, reset force_download
system("sed -i 's/cfg$force_download <- TRUE/cfg$force_download <- FALSE/' config/default.cfg")

# now start actual test runs
system(paste0("Rscript start.R ",
"startgroup=AMT titletag=AMT slurmConfig=\"--qos=standby --nodes=1 --tasks-per-node=12\" ",
"startgroup=AMT titletag=AMT slurmConfig=\"--qos=standby --nodes=1 --tasks-per-node=12 --time=36:00:00\" ",
"config/scenario_config.csv"))

# Create and save a list of runs that should have been started in order to determine later which runs were not started
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6 changes: 3 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# Run Analysis Tools

R package **modelstats**, version **0.21.20**
R package **modelstats**, version **0.21.21**

[![CRAN status](https://www.r-pkg.org/badges/version/modelstats)](https://cran.r-project.org/package=modelstats) [![R build status](https://github.com/pik-piam/modelstats/workflows/check/badge.svg)](https://github.com/pik-piam/modelstats/actions) [![codecov](https://codecov.io/gh/pik-piam/modelstats/branch/master/graph/badge.svg)](https://app.codecov.io/gh/pik-piam/modelstats) [![r-universe](https://pik-piam.r-universe.dev/badges/modelstats)](https://pik-piam.r-universe.dev/builds)

Expand Down Expand Up @@ -47,7 +47,7 @@ In case of questions / problems please contact Anastasis Giannousakis <giannou@p

To cite package **modelstats** in publications use:

Giannousakis A, Richters O (2024). _modelstats: Run Analysis Tools_. R package version 0.21.20, <https://github.com/pik-piam/modelstats>.
Giannousakis A, Richters O (2024). _modelstats: Run Analysis Tools_. R package version 0.21.21, <https://github.com/pik-piam/modelstats>.

A BibTeX entry for LaTeX users is

Expand All @@ -56,7 +56,7 @@ A BibTeX entry for LaTeX users is
title = {modelstats: Run Analysis Tools},
author = {Anastasis Giannousakis and Oliver Richters},
year = {2024},
note = {R package version 0.21.20},
note = {R package version 0.21.21},
url = {https://github.com/pik-piam/modelstats},
}
```