add doc about using all gRNAs for LFC

pinellolab · Oct 4, 2023 · e83dcf5 · e83dcf5
1 parent 797e6b6
commit e83dcf5
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/bean/qc/utils.py b/bean/qc/utils.py
@@ -87,9 +87,9 @@ def parse_args():
     )
     parser.add_argument(
         "--posctrl-col",
-        help="Column name in ReporterScreen.guides DataFrame that specifies guide category.",
+        help="Column name in ReporterScreen.guides DataFrame that specifies guide category. To use all gRNAs, feed empty string ''.",
         type=str,
-        default="target_group",
+        default="target_col",
     )
     parser.add_argument(
         "--posctrl-val",