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Merge pull request #63 from plantbreeding/24-07-08-raubach-jhi-updates
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JHI updates
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BrapiCoordinatorSelby authored Jul 9, 2024
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2 changes: 1 addition & 1 deletion content/03.04.05.Germinate.md
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#### Germinate

<!-- Sebastian R -->
[Germinate](https://ics.hutton.ac.uk/get-germinate/) [@doi:10.1002/csc2.20248] is an open-source plant genetic resources database that combines and integrates various kinds of plant breeding data including genotypic data, phenotypic trials data, passport data, images, geographic information and climate data into a single repository. Germinate is tightly linked to the BrAPI specification and supports a majority of BrAPI endpoints for querying, filtering, and submission.
[Germinate](https://ics.hutton.ac.uk/get-germinate/) [@doi:10.1002/csc2.20248;@doi:10.2135/cropsci2016.09.0814] is an open-source plant genetic resources database that combines and integrates various kinds of plant breeding data including genotypic data, phenotypic trials data, passport data, images, geographic information and climate data into a single repository. Germinate is tightly linked to the BrAPI specification and supports a majority of BrAPI endpoints for querying, filtering, and submission.

Germinate integrates and connects with other BrAPI-enabled tools such as GridScore for phenotypic data collection, Flapjack for genotypic data visualization, and Helium for pedigree visualization. Additionally, due to the nature of BrAPI, Germinate can act as a data repository for any BrAPI-compatible tool. Thanks to the interoperability provided by BrAPI, the need for manual data handling becomes a rarity with the direct benefit of faster data processing, fewer to no human errors, data security, and data integrity.
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orcid: 0000-0002-4126-0859
email: [email protected]
affiliations:
- The James Hutton Institute
- Information and Computational Sciences Department, The James Hutton Institute, Dundee, Scotland
- name: Lukas A. Mueller
initials: LAM
github: lukasmueller
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orcid: 0000-0001-5659-247X
email: [email protected]
affiliations:
- The James Hutton Institute
- Information and Computational Sciences Department, The James Hutton Institute, Dundee, Scotland
- name: Trevor Rife
initials: TR
github: trife
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orcid: 0000-0002-0202-1150
email: [email protected]
affiliations:
- The James Hutton Institute
- Information and Computational Sciences Department, The James Hutton Institute, Dundee, Scotland
- name: Becky Smith
initials: BS
github: Batbaby91
orcid: 0000-0002-8968-3383
email: [email protected]
affiliations:
- The James Hutton Institute
- Information and Computational Sciences Department, The James Hutton Institute, Dundee, Scotland
- name: Nahuel Soldevilla
initials: NS
email: [email protected]
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