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BrapiCoordinatorSelby committed Jun 26, 2024
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4 changes: 2 additions & 2 deletions README.md
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# Output directory containing the formatted manuscript

The [`gh-pages`](https://github.com/plantbreeding/BrAPI-Manuscript2/tree/gh-pages) branch hosts the contents of this directory at <https://plantbreeding.github.io/BrAPI-Manuscript2/>.
The permalink for this webpage version is <https://plantbreeding.github.io/BrAPI-Manuscript2/v/801c3171356a9c524eac7b5a0025c8bca77a87d4/>.
The permalink for this webpage version is <https://plantbreeding.github.io/BrAPI-Manuscript2/v/31f24130b935c2a476426d8ce5e604d72b0eaa86/>.
To redirect to the permalink for the latest manuscript version at anytime, use the link <https://plantbreeding.github.io/BrAPI-Manuscript2/v/freeze/>.

## Files
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## Source

The manuscripts in this directory were built from
[`801c3171356a9c524eac7b5a0025c8bca77a87d4`](https://github.com/plantbreeding/BrAPI-Manuscript2/commit/801c3171356a9c524eac7b5a0025c8bca77a87d4).
[`31f24130b935c2a476426d8ce5e604d72b0eaa86`](https://github.com/plantbreeding/BrAPI-Manuscript2/commit/31f24130b935c2a476426d8ce5e604d72b0eaa86).
57 changes: 43 additions & 14 deletions index.html
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<meta name="author" content="Taein Lee" />
<meta name="author" content="Erwan Le-Floch" />
<meta name="author" content="Francisco López" />
<meta name="author" content="Brandon Madriz" />
<meta name="author" content="Marco Marsella" />
<meta name="author" content="Maud Marty" />
<meta name="author" content="Célia Michotey" />
Expand All @@ -64,12 +65,13 @@
<meta name="author" content="Paul Shaw" />
<meta name="author" content="Becky Smith" />
<meta name="author" content="Nahuel Soldevilla" />
<meta name="author" content="Kauê de Sousa" />
<meta name="author" content="Clarysabel Tovar" />
<meta name="author" content="Grzegorz Uszynski" />
<meta name="author" content="Vivian Bass Vega" />
<meta name="author" content="Stephan Weise" />
<meta name="author" content="Shawn C Yarnes" />
<meta name="dcterms.date" content="2024-06-25" />
<meta name="dcterms.date" content="2024-06-26" />
<meta name="keywords" content="brapi, breeding, api, standards, community" />
<title>BrAPI Success Stories</title>
<style>
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<meta name="citation_title" content="BrAPI Success Stories" />
<meta property="og:title" content="BrAPI Success Stories" />
<meta property="twitter:title" content="BrAPI Success Stories" />
<meta name="dc.date" content="2024-06-25" />
<meta name="citation_publication_date" content="2024-06-25" />
<meta property="article:published_time" content="2024-06-25" />
<meta name="dc.modified" content="2024-06-25T21:34:40+00:00" />
<meta property="article:modified_time" content="2024-06-25T21:34:40+00:00" />
<meta name="dc.date" content="2024-06-26" />
<meta name="citation_publication_date" content="2024-06-26" />
<meta property="article:published_time" content="2024-06-26" />
<meta name="dc.modified" content="2024-06-26T17:33:28+00:00" />
<meta property="article:modified_time" content="2024-06-26T17:33:28+00:00" />
<meta name="dc.language" content="en-US" />
<meta name="citation_language" content="en-US" />
<meta name="dc.relation.ispartof" content="Manubot" />
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<meta name="citation_author_orcid" content="0000-0003-4096-6689" />
<meta name="citation_author" content="Matthijs Brouwer" />
<meta name="citation_author_institution" content="Wageningen University and Research" />
<meta name="citation_author_orcid" content="0000-0001-8183-0484" />
<meta name="citation_author" content="Terry Casstevens" />
<meta name="citation_author_institution" content="Cornell University" />
<meta name="citation_author_orcid" content="0000-0001-7602-0487" />
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<meta name="citation_author_institution" content="Leibniz Institute of Plant Genetics and Crop Plant Research" />
<meta name="citation_author_orcid" content="0000-0002-4316-078X" />
<meta name="citation_author" content="Marie Angelique Laporte" />
<meta name="citation_author_institution" content="Alliance Bioversity-CIAT" />
<meta name="citation_author_institution" content="Digital Inclusion, Bioversity International, Montpellier, France." />
<meta name="citation_author_orcid" content="0000-0002-8461-9745" />
<meta name="citation_author" content="Taein Lee" />
<meta name="citation_author_institution" content="Department of Horticulture, Washington State University" />
Expand All @@ -235,6 +238,8 @@
<meta name="citation_author_institution" content="Université Paris-Saclay, INRAE, URGI, Versailles, France" />
<meta name="citation_author" content="Francisco López" />
<meta name="citation_author_institution" content="International Treaty on Plant Genetic Resources for Food and Agriculture, FAO" />
<meta name="citation_author" content="Brandon Madriz" />
<meta name="citation_author_institution" content="MrBot Software Solutions, Cartago, Costa Rica" />
<meta name="citation_author" content="Marco Marsella" />
<meta name="citation_author_institution" content="International Treaty on Plant Genetic Resources for Food and Agriculture, FAO" />
<meta name="citation_author_orcid" content="0000-0003-0334-8785" />
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<meta name="citation_author" content="Nahuel Soldevilla" />
<meta name="citation_author_institution" content="Integrated Breeding Platform" />
<meta name="citation_author_institution" content="Leafnode LLC" />
<meta name="citation_author" content="Kauê de Sousa" />
<meta name="citation_author_institution" content="Digital Inclusion, Bioversity International, Montpellier, France" />
<meta name="citation_author_orcid" content="0000-0002-7571-7845" />
<meta name="citation_author" content="Clarysabel Tovar" />
<meta name="citation_author_institution" content="Integrated Breeding Platform" />
<meta name="citation_author_institution" content="Leafnode LLC" />
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<meta name="citation_fulltext_html_url" content="https://plantbreeding.github.io/BrAPI-Manuscript2/" />
<meta name="citation_pdf_url" content="https://plantbreeding.github.io/BrAPI-Manuscript2/manuscript.pdf" />
<link rel="alternate" type="application/pdf" href="https://plantbreeding.github.io/BrAPI-Manuscript2/manuscript.pdf" />
<link rel="alternate" type="text/html" href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/801c3171356a9c524eac7b5a0025c8bca77a87d4/" />
<meta name="manubot_html_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/801c3171356a9c524eac7b5a0025c8bca77a87d4/" />
<meta name="manubot_pdf_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/801c3171356a9c524eac7b5a0025c8bca77a87d4/manuscript.pdf" />
<link rel="alternate" type="text/html" href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/31f24130b935c2a476426d8ce5e604d72b0eaa86/" />
<meta name="manubot_html_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/31f24130b935c2a476426d8ce5e604d72b0eaa86/" />
<meta name="manubot_pdf_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/31f24130b935c2a476426d8ce5e604d72b0eaa86/manuscript.pdf" />
<meta property="og:type" content="article" />
<meta property="twitter:card" content="summary_large_image" />
<link rel="icon" type="image/png" sizes="192x192" href="https://manubot.org/favicon-192x192.png" />
Expand All @@ -336,10 +344,10 @@ <h1 class="title">BrAPI Success Stories</h1>
</header>
<p><small><em>
This manuscript
(<a href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/801c3171356a9c524eac7b5a0025c8bca77a87d4/">permalink</a>)
(<a href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/31f24130b935c2a476426d8ce5e604d72b0eaa86/">permalink</a>)
was automatically generated
from <a href="https://github.com/plantbreeding/BrAPI-Manuscript2/tree/801c3171356a9c524eac7b5a0025c8bca77a87d4">plantbreeding/BrAPI-Manuscript2@801c317</a>
on June 25, 2024.
from <a href="https://github.com/plantbreeding/BrAPI-Manuscript2/tree/31f24130b935c2a476426d8ce5e604d72b0eaa86">plantbreeding/BrAPI-Manuscript2@31f2413</a>
on June 26, 2024.
</em></small></p>
<h2 id="authors">Authors</h2>
<ul>
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</small></p></li>
<li><p><strong>Matthijs Brouwer</strong>
<br>
<img src="images/orcid.svg" class="inline_icon" width="16" height="16" alt="ORCID icon" />
<a href="https://orcid.org/0000-0001-8183-0484">0000-0001-8183-0484</a>
· <img src="images/github.svg" class="inline_icon" width="16" height="16" alt="GitHub icon" />
<a href="https://github.com/matthijsbrouwer">matthijsbrouwer</a>
<br>
<small>
Wageningen University and Research
</small></p></li>
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<a href="https://github.com/marieALaporte">marieALaporte</a>
<br>
<small>
Alliance Bioversity-CIAT
Digital Inclusion, Bioversity International, Montpellier, France.
</small></p></li>
<li><p><strong>Taein Lee</strong>
<br>
Expand All @@ -663,6 +676,11 @@ <h2 id="authors">Authors</h2>
<small>
International Treaty on Plant Genetic Resources for Food and Agriculture, FAO
</small></p></li>
<li><p><strong>Brandon Madriz</strong>
<br>
<small>
MrBot Software Solutions, Cartago, Costa Rica
</small></p></li>
<li><p><strong>Marco Marsella</strong>
<br>
<img src="images/orcid.svg" class="inline_icon" width="16" height="16" alt="ORCID icon" />
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<small>
Integrated Breeding Platform; Leafnode LLC
</small></p></li>
<li><p><strong>Kauê de Sousa</strong>
<br>
<img src="images/orcid.svg" class="inline_icon" width="16" height="16" alt="ORCID icon" />
<a href="https://orcid.org/0000-0002-7571-7845">0000-0002-7571-7845</a>
<br>
<small>
Digital Inclusion, Bioversity International, Montpellier, France
</small></p></li>
<li><p><strong>Clarysabel Tovar</strong>
<br>
<small>
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<li><strong>Mariano Crimi</strong>: Mariano has made significant contributions to the BMS project.</li>
<li><strong>Gouripriya Davuluri</strong>: Gouripriya has made significant contributions to the AGENT Portal project.</li>
<li><strong>Jeremy Destin</strong>: Jeremy has made significant contributions to the Florilège and Faidare projects.</li>
<li><strong>Ajay Dhungana</strong>: Ajay wrote section introductions for the Phenotyping, Genotyping, and Germplasm topics.</li>
<li><strong>Bert Droesbeke</strong>: Bert wrote the section on the BrAPI2ISA project, and has made significant contributions to the BrAPI compatibility of the BrAPI2ISA project.</li>
<li><strong>Manuel Feser</strong>: Manuel wrote the section on the MIRA project, and has made significant contributions to the BrAPI compatibility of the MIRA project.</li>
<li><strong>Mirella Flores-Gonzalez</strong>: Mirella wrote the section on the Trait Selector BrAPP project, and has made significant contributions to the BrAPI compatibility of the Trait Selector BrAPP and Breedbase projects.</li>
Expand Down Expand Up @@ -1194,10 +1221,12 @@ <h2 class="page_break_before" id="author-contributions">Author Contributions</h2
<li><strong>Iain Milne</strong>: Iain has made significant contributions to the Flapjack, Gridscore, and Germinate projects.</li>
<li><strong>Lukas Mueller</strong>: Lukas wrote the section on the Breedbase project, and has made significant contributions to the BrAPI compatibility of the Breedbase project. Lukas is also Co-PI on the current BrAPI Grant and has supported the project since its inception.</li>
<li><strong>Moses Nderitu</strong>: Moses wrote the section on the DArTView project, and has made significant contributions to the BrAPI compatibility of the DArTView project.</li>
<li><strong>Tim Parsons</strong>: Tim has made significant contributions to the DeltaBreed project.</li>
<li><strong>Cyril Pommier</strong>: Cyril wrote the section on the Faidare project, and has made significant contributions to the BrAPI compatibility of the Florilège, Faidare, and AGENT Portal projects.</li>
<li><strong>Jean-François Rami</strong>: Jean-François wrote the section on the ShinyBrAPPs project, and has made significant contributions to the BrAPI compatibility of the ShinyBrAPPs project.</li>
<li><strong>Sebastian Raubach</strong>: Sebastian wrote the sections on the GridScore and Germinate projects, and has made significant contributions to the BrAPI compatibility of the GridScore, Germinate, and Flapjack projects.</li>
<li><strong>Trevor Rife</strong>: Trevor has made significant contributions to the Field Book project.</li>
<li><strong>Kelly Robbins</strong>: Kelly is the PI for the BrAPI Project grant, and has supported all technical and scientific aspects of the project.</li>
<li><strong>Mathieu Rouard</strong>: Mathieu wrote the section on the MGIS project, and has made significant contributions to the BrAPI compatibility of the MGIS project.</li>
<li><strong>Joseph Ruff</strong>: Joseph has made significant contributions to the AGENT Portal project.</li>
<li><strong>Guilhem Sempéré</strong>: Guilhem wrote the section on the Gigwa project, and has made significant contributions to the BrAPI compatibility of the Gigwa project.</li>
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