ref formatting

[ci skip] This build is based on 88c1a8e. This commit was created by the following CI build and job: https://github.com/plantbreeding/BrAPI-Manuscript2/commit/88c1a8ee99e8415c034b415ecff46cae13f27410/checks https://github.com/plantbreeding/BrAPI-Manuscript2/actions/runs/11040893184
plantbreeding · Sep 25, 2024 · ac8358d · ac8358d
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diff --git a/README.md b/README.md
@@ -1,7 +1,7 @@
 # Output directory containing the formatted manuscript
 
 The [`gh-pages`](https://github.com/plantbreeding/BrAPI-Manuscript2/tree/gh-pages) branch hosts the contents of this directory at <https://plantbreeding.github.io/BrAPI-Manuscript2/>.
-The permalink for this webpage version is <https://plantbreeding.github.io/BrAPI-Manuscript2/v/37308571bc08daac2944ede9765be2b308d14797/>.
+The permalink for this webpage version is <https://plantbreeding.github.io/BrAPI-Manuscript2/v/88c1a8ee99e8415c034b415ecff46cae13f27410/>.
 To redirect to the permalink for the latest manuscript version at anytime, use the link <https://plantbreeding.github.io/BrAPI-Manuscript2/v/freeze/>.
 
 ## Files
@@ -35,4 +35,4 @@ Verifying timestamps with the `ots verify` command requires running a local bitc
 ## Source
 
 The manuscripts in this directory were built from
-[`37308571bc08daac2944ede9765be2b308d14797`](https://github.com/plantbreeding/BrAPI-Manuscript2/commit/37308571bc08daac2944ede9765be2b308d14797).
+[`88c1a8ee99e8415c034b415ecff46cae13f27410`](https://github.com/plantbreeding/BrAPI-Manuscript2/commit/88c1a8ee99e8415c034b415ecff46cae13f27410).
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diff --git a/manuscript.pdf b/manuscript.pdf
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diff --git a/v/88c1a8ee99e8415c034b415ecff46cae13f27410/images/BrAPI_Application_Chart.pdf b/v/88c1a8ee99e8415c034b415ecff46cae13f27410/images/BrAPI_Application_Chart.pdf
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