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rm mac test

aineniamhpushed 1 commit to dep-issues • a4f0792…9b6957c • 
on Sep 13

piranha update command to medaka for later version

aineniamhpushed 1 commit to dep-issues • 4788168…a4f0792 • 
on Sep 13

python 3.8 for torch 2.4.1

aineniamhpushed 1 commit to dep-issues • eabcedc…4788168 • 
on Sep 13

rm python pin

aineniamhpushed 1 commit to dep-issues • 36f1591…eabcedc • 
on Sep 12

torch specify

aineniamhpushed 2 commits to dep-issues • 3572d4c…36f1591 • 
on Sep 12

Deleted branch

rmcolqdeleted dev • 
on Sep 12

Merge branch 'dep-issues' of https://github.com/aineniamh/piranha int…

aineniamhpushed 2 commits to dep-issues • 24cb940…3572d4c • 
on Sep 12

Update piranha.yml

aineniamhpushed 1 commit to dep-issues • 20d2141…24cb940 • 
on Aug 30

fix med v

aineniamhpushed 1 commit to dep-issues • 47b3be1…20d2141 • 
on Aug 30

medaka from nanoporetech channel

aineniamhcreated dep-issues • 47b3be1 • 
on Aug 30

overwrite readdir input with the dir you actually find the reads in w…

aineniamhpushed 2 commits to main • 8ce43b8…852a5f0 • 
on Aug 29

bump version for 0 arg patch

aineniamhpushed 2 commits to main • 18f026d…8ce43b8 • 
on Aug 29

minor v bump for the new release with wt-dev

aineniamhpushed 1 commit to main • 5742323…18f026d • 
on Aug 8

Deleted branch

aineniamhdeleted wt-dev • 
on Aug 2

Merge pull request #222 from polio-nanopore/wt-dev

Pull request merge
aineniamhpushed 36 commits to main • f8e386e…5742323 • 
on Aug 2

fixing plate viz

aineniamhpushed 1 commit to wt-dev • 4c22ebd…41fc279 • 
on Aug 2

update citation link

aineniamhpushed 1 commit to wt-dev • 26dcf9b…4c22ebd • 
on Aug 2

move url to new location of repo

aineniamhpushed 2 commits to wt-dev • f817538…26dcf9b • 
on Aug 2

changing smk files to just one main that does everything including ma…

aineniamhpushed 2 commits to wt-dev • 5f14e42…f817538 • 
on Aug 2

Merge pull request #243 from polio-nanopore/main

Pull request merge
aineniamhpushed 12 commits to wt-dev • 7f31fe7…5f14e42 • 
on Aug 2

producing the masked sites json

aineniamhpushed 5 commits to wt-dev • a19c4af…7f31fe7 • 
on Aug 2

Merge pull request #237 from polio-nanopore/dev

Pull request merge
rmcolqpushed 11 commits to main • 81da973…f8e386e • 
on Aug 2

merge in maskara to setup

aineniamhpushed 22 commits to wt-dev • 7b3e953…a19c4af • 
on Aug 1

add a small test run to check for segfaults

rmcolqpushed 1 commit to dev • 302a46e…b274f9e • 
on Jun 21

remove the branch as now working

rmcolqpushed 1 commit to dev • 7615ffc…302a46e • 
on Jun 21

remove pyabpoa again

rmcolqpushed 1 commit to dev • d2f4215…7615ffc • 
on Jun 21

add branch back in so the dev dockerfile on dockerhub works

rmcolqpushed 1 commit to dev • 72c5656…d2f4215 • 
on Jun 21

update dockerfile so pulls from main branch once merges. This will be…

rmcolqpushed 1 commit to dev • 2aa861f…72c5656 • 
on Jun 21

add pyabpoa back

rmcolqpushed 1 commit to dev • e8efd04…2aa861f • 
on Jun 21

WIP

rmcolqpushed 1 commit to dev • 6fe02cc…e8efd04 • 
on Jun 21