piranha update command to medaka for later version
python 3.8 for torch 2.4.1
medaka from nanoporetech channel
overwrite readdir input with the dir you actually find the reads in w…
bump version for 0 arg patch
minor v bump for the new release with wt-dev
Merge pull request
#222 from polio-nanopore/wt-dev
Pull request merge
move url to new location of repo
changing smk files to just one main that does everything including ma…
Merge pull request
#243 from polio-nanopore/main
Pull request merge
producing the masked sites json
Merge pull request
#237 from polio-nanopore/dev
Pull request merge
rmcolqpushed 11 commits to main • 81da973…f8e386e • on Aug 2
merge in maskara to setup
add a small test run to check for segfaults
rmcolqpushed 1 commit to dev • 302a46e…b274f9e • on Jun 21
remove the branch as now working
rmcolqpushed 1 commit to dev • 7615ffc…302a46e • on Jun 21
rmcolqpushed 1 commit to dev • d2f4215…7615ffc • on Jun 21
add branch back in so the dev dockerfile on dockerhub works
rmcolqpushed 1 commit to dev • 72c5656…d2f4215 • on Jun 21
update dockerfile so pulls from main branch once merges. This will be…
rmcolqpushed 1 commit to dev • 2aa861f…72c5656 • on Jun 21
rmcolqpushed 1 commit to dev • e8efd04…2aa861f • on Jun 21
rmcolqpushed 1 commit to dev • 6fe02cc…e8efd04 • on Jun 21
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