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default depth threshold has changed from 50 to 20? #260

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cathrnbp opened this issue Oct 17, 2024 · 0 comments
Open

default depth threshold has changed from 50 to 20? #260

cathrnbp opened this issue Oct 17, 2024 · 0 comments

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@cathrnbp
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Using the command line piranha, consensus sequences are being called in the detailed_run_report despite having less than 50 reads. Minimum now seems to be 20? Can the default be changed back to 50?
@cathrnbp cathrnbp changed the title default threshold has changed from 50 to 20? default depth threshold has changed from 50 to 20? Oct 17, 2024
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