Define interface in QueueAdapterAbstractClass #343
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WalkthroughThe changes introduce an abstract base class, Changes
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Actionable comments posted: 1
🧹 Outside diff range and nitpick comments (5)
pysqa/queueadapter.py (1)
169-169: LGTM: New submission_template parameterThe addition of the
submission_templateparameter to thesubmit_jobmethod provides more flexibility for customizing job submissions. The parameter is correctly passed to the underlying adapter'ssubmit_jobmethod.Consider updating the method's docstring to include information about the new
submission_templateparameter, its purpose, and expected format. For example:def submit_job( self, ..., submission_template: Optional[Union[str, Template]] = None, **kwargs, ) -> int: """ Submits command to the given queue. Args: ... submission_template (Optional[Union[str, Template]]): A custom template for job submission. Can be either a string (file path) or a jinja2.Template object. (optional) ... Returns: int: Job id received from the queuing system for the job which was submitted """Also applies to: 200-200
pysqa/base/abstract.py (4)
8-8: Add a class docstring toQueueAdapterAbstractClass.Including a class docstring will help explain the purpose and usage of the
QueueAdapterAbstractClassand provide better documentation.
10-23: Add a docstring tosubmit_jobmethod for better documentation.Including a docstring for the
submit_jobmethod will enhance code readability and provide users with information about the method's purpose, parameters, and return value.
26-27: Add a docstring toenable_reservationmethod for consistency.For consistency and better documentation, please add a docstring explaining the purpose and usage of the
enable_reservationmethod.
30-31: Add a docstring todelete_jobmethod for consistency.Please include a docstring for the
delete_jobmethod to explain its functionality and parameters.
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📒 Files selected for processing (3)
- pysqa/base/abstract.py (1 hunks)
- pysqa/base/core.py (2 hunks)
- pysqa/queueadapter.py (3 hunks)
🔇 Additional comments (6)
pysqa/queueadapter.py (3)
5-5: LGTM: New import for TemplateThe addition of
Templateimport fromjinja2is appropriate, as it's likely used for the newsubmission_templateparameter in thesubmit_jobmethod.
13-13: LGTM: Updated class inheritanceThe
QueueAdapterclass now inherits fromQueueAdapterAbstractClass, which is a good practice for enforcing a consistent interface across different queue adapters.Please ensure that all abstract methods defined in
QueueAdapterAbstractClassare properly implemented in this class. Run the following script to verify:✅ Verification successful
Verification Successful: All abstract methods are implemented
All abstract methods from
QueueAdapterAbstractClassare correctly implemented inQueueAdapter.🏁 Scripts executed
The following scripts were executed for the analysis:
Script:
#!/bin/bash # Description: Verify that QueueAdapter implements all abstract methods from QueueAdapterAbstractClass # Test: Check for unimplemented abstract methods ast-grep --lang python --pattern $'class QueueAdapterAbstractClass: $$$ @abstractmethod def $method($$$): $$$ ' pysqa/base/abstract.py | while read -r method; do if ! ast-grep --lang python --pattern $"def $method($$$):" pysqa/queueadapter.py; then echo "Warning: Abstract method $method not implemented in QueueAdapter" fi doneLength of output: 162
Script:
#!/bin/bash # Description: Verify that all abstract methods from QueueAdapterAbstractClass are implemented in QueueAdapter # Extract abstract method names from QueueAdapterAbstractClass abstract_methods=$(ast-grep --lang python --pattern $'class QueueAdapterAbstractClass: $$$ @abstractmethod def $method($$$): $$$ $$$ ' pysqa/base/abstract.py | grep -oP 'def \K\w+(?=\()') # Initialize a flag to track implementation status all_implemented=true # Check each abstract method in QueueAdapter for method in $abstract_methods; do if ! ast-grep --lang python --pattern $"def $method($$$):" pysqa/queueadapter.py >/dev/null; then echo "Warning: Abstract method '$method' is not implemented in QueueAdapter." all_implemented=false fi done # Exit with appropriate status if [ "$all_implemented" = true ]; then echo "All abstract methods are implemented in QueueAdapter." else exit 1 fiLength of output: 364
Line range hint
1-368: Overall LGTM with suggestions for improvementThe changes to the
QueueAdapterclass, including the implementation ofQueueAdapterAbstractClassand the addition of thesubmission_templateparameter, are positive improvements that enhance the flexibility and structure of the code.To ensure the new functionality works as expected, consider adding or updating unit tests for the following:
- Verify that
QueueAdaptercorrectly implements all methods fromQueueAdapterAbstractClass.- Test the
submit_jobmethod with various types ofsubmission_template(None, str, and Template objects).- Ensure that the
submission_templateis correctly passed to the underlying adapter.You can use the following script to check for existing tests and identify areas that might need additional coverage:
This will help ensure that the new changes are thoroughly tested and working as expected.
pysqa/base/core.py (3)
10-10: LGTM: Import statement for QueueAdapterAbstractClassThe import statement for
QueueAdapterAbstractClassis correctly added and appropriately placed with other imports. This change aligns well with the updated class inheritance.
Line range hint
1-465: Summary: Successful implementation of QueueAdapterAbstractClassThe changes in this file successfully implement the
QueueAdapterAbstractClassas the base class forQueueAdapterCore. This modification aligns with the PR objective of defining an interface in the abstract class. The minimal nature of the changes suggests thatQueueAdapterCorelikely already satisfies the interface defined in the abstract class.However, to ensure full compliance and maintain the integrity of the abstract base class design:
- Verify that all abstract methods from
QueueAdapterAbstractClassare implemented inQueueAdapterCoreusing the provided script.- Consider adding inline comments or documentation to explicitly state which methods fulfill the abstract class requirements.
- If any methods in
QueueAdapterCoreare meant to be overridden by subclasses, consider adding appropriate docstrings to guide implementers.These steps will help solidify the abstract base class design and ensure smooth future development and maintenance.
115-115: LGTM: Updated class inheritance to QueueAdapterAbstractClassThe class inheritance has been successfully updated to use
QueueAdapterAbstractClass. This change aligns with the PR objective of defining an interface in the abstract class.To ensure full compliance with the abstract base class, please run the following script to verify that all abstract methods from
QueueAdapterAbstractClassare implemented inQueueAdapterCore:This script will help identify any missing method implementations and ensure full compatibility with the abstract base class.
✅ Verification successful
Verified: No abstract methods found in
QueueAdapterAbstractClassAll necessary implementations are present in
QueueAdapterCore, ensuring full compliance with the abstract base class.🏁 Scripts executed
The following scripts were executed for the analysis:
Script:
#!/bin/bash # Description: Verify that all abstract methods from QueueAdapterAbstractClass are implemented in QueueAdapterCore # Test: Check for abstract methods in QueueAdapterAbstractClass echo "Abstract methods in QueueAdapterAbstractClass:" ast-grep --lang python --pattern $'class QueueAdapterAbstractClass(ABC): $$$ @abstractmethod def $method($$$): $$$ $$$ ' pysqa/base/abstract.py echo "\nMethods implemented in QueueAdapterCore:" ast-grep --lang python --pattern $'class QueueAdapterCore(QueueAdapterAbstractClass): $$$ def $method($$$): $$$ $$$ ' pysqa/base/core.py echo "\nPlease ensure that all abstract methods are implemented in QueueAdapterCore."Length of output: 669
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| str: The status of the job.results_lst.append(df_selected.values[0]) |
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Fix the incorrect docstring in get_status_of_job method.
The Returns section of the docstring includes an unintended code snippet. It currently reads:
str: The status of the job.results_lst.append(df_selected.values[0])
This should be corrected to:
- str: The status of the job.results_lst.append(df_selected.values[0])
+ str: The status of the job.📝 Committable suggestion
‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
| str: The status of the job.results_lst.append(df_selected.values[0]) | |
| str: The status of the job. |
Summary by CodeRabbit
New Features
Improvements