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Update Readme #347

Merged
merged 1 commit into from
Sep 28, 2024
Merged

Update Readme #347

merged 1 commit into from
Sep 28, 2024

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jan-janssen
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@jan-janssen jan-janssen commented Sep 28, 2024

Summary by CodeRabbit

  • Documentation
    • Improved clarity and detail in the README.md for the pysqa project.
    • Enhanced descriptions for defining and reusing submission script templates.
    • Updated features section with method signatures for core functionalities.
    • Reformatted documentation for better navigation and consistency.

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coderabbitai bot commented Sep 28, 2024

Walkthrough

The changes in this pull request focus on enhancing the README.md documentation for the pysqa project. Key modifications include a clearer introduction to the project, refined explanations of submission script templates, and an updated features section with method signatures for core functionalities. The documentation structure has been improved for better navigation, and the license section has been reformatted for consistency. These changes aim to improve the clarity and usability of the documentation while maintaining the existing functionality of the system.

Changes

Files Change Summary
README.md Rephrased introduction, refined description of submission script templates, updated features section with method signatures for job submission, queue status retrieval, job deletion, and template management. Reformatted documentation structure and license section for consistency.

Poem

🐰 In the garden of code, where changes bloom,
The README now shines, dispelling the gloom.
With signatures clear, and templates in sight,
The pysqa project is ready to take flight!
Hop along, dear users, with tasks to submit,
Our queuing system's now a perfect fit! 🌼


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Actionable comments posted: 0

🧹 Outside diff range and nitpick comments (3)
README.md (3)

8-19: Great improvements to the introduction, with some minor suggestions.

The expanded introduction provides a clear and informative overview of pysqa. Here are a few suggestions to further improve it:

  1. Consider adding a comma after "In this context" on line 8 for better readability.
  2. The phrase "based on the assumption that" on line 10 could be more concise. Consider rewording to something like "This is achieved because most users submit..."
  3. On line 14, "afterwards" is more common in British English. Consider using "afterward" for consistency with American English.
  4. On line 18, hyphenate "two-factor" when used as a modifier.

Here's a suggested revision for the first sentence:

-High-performance computing (HPC) does not have to be hard. In this context the aim of the Python Simple Queuing System 
+High-performance computing (HPC) does not have to be hard. In this context, the aim of the Python Simple Queuing System 
🧰 Tools
🪛 LanguageTool

[typographical] ~8-~8: It appears that a comma is missing.
Context: ...(HPC) does not have to be hard. In this context the aim of the Python Simple Queuing Sy...

(DURING_THAT_TIME_COMMA)


[style] ~10-~10: ‘based on the assumption that’ might be wordy. Consider a shorter alternative.
Context: ... subprocess locally. This is achieved based on the assumption that even though modern HPC queuing systems ...

(EN_WORDINESS_PREMIUM_BASED_ON_THE_ASSUMPTION_THAT)


[locale-violation] ~14-~14: In American English, ‘afterward’ is the preferred variant. ‘Afterwards’ is more commonly used in British English and other dialects.
Context: ...mit many different tasks and workflows afterwards. These templates are defined in the [ji...

(AFTERWARDS_US)


[grammar] ~18-~18: When ‘two-factor’ is used as a modifier, it is usually spelled with a hyphen.
Context: ...usters using SSH including support for two factor authentication via [pyauthenticator](ht...

(FACTOR_HYPHEN)


24-46: Excellent expansion of the features section.

The addition of method signatures and detailed explanations greatly enhances the documentation. This provides users with a clear overview of pysqa's capabilities.

There's one minor grammatical issue to address:

On line 43, replace "as well as" with "and" after "both" for correct usage:

-Support for both individual connections as well as continuous connections depending on the network availability. 
+Support for both individual connections and continuous connections depending on the network availability. 
🧰 Tools
🪛 LanguageTool

[grammar] ~43-~43: Probable usage error. Use “and” after ‘both’.
Context: ...Support for both individual connections as well as continuous connections depending on the...

(BOTH_AS_WELL_AS)


79-82: License section formatting can be improved.

The license section content is appropriate, but there are two instances of bare URLs that should be formatted as proper Markdown links for better readability and to follow Markdown best practices.

Please update the following lines:

-`pysqa` is released under the BSD license https://github.com/pyiron/pysqa/blob/main/LICENSE . It is a spin-off of the 
-`pyiron` project https://github.com/pyiron/pyiron therefore if you use `pysqa` for calculation which result in a 
+`pysqa` is released under the [BSD license](https://github.com/pyiron/pysqa/blob/main/LICENSE). It is a spin-off of the 
+[`pyiron` project](https://github.com/pyiron/pyiron) therefore if you use `pysqa` for calculation which result in a 

Also, consider adding a comma after "therefore" for better readability.

🧰 Tools
🪛 Markdownlint

80-80: null
Bare URL used

(MD034, no-bare-urls)


81-81: null
Bare URL used

(MD034, no-bare-urls)

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between 6ccd8be and ae6f1b0.

📒 Files selected for processing (1)
  • README.md (2 hunks)
🧰 Additional context used
🪛 LanguageTool
README.md

[typographical] ~8-~8: It appears that a comma is missing.
Context: ...(HPC) does not have to be hard. In this context the aim of the Python Simple Queuing Sy...

(DURING_THAT_TIME_COMMA)


[style] ~10-~10: ‘based on the assumption that’ might be wordy. Consider a shorter alternative.
Context: ... subprocess locally. This is achieved based on the assumption that even though modern HPC queuing systems ...

(EN_WORDINESS_PREMIUM_BASED_ON_THE_ASSUMPTION_THAT)


[locale-violation] ~14-~14: In American English, ‘afterward’ is the preferred variant. ‘Afterwards’ is more commonly used in British English and other dialects.
Context: ...mit many different tasks and workflows afterwards. These templates are defined in the [ji...

(AFTERWARDS_US)


[grammar] ~18-~18: When ‘two-factor’ is used as a modifier, it is usually spelled with a hyphen.
Context: ...usters using SSH including support for two factor authentication via [pyauthenticator](ht...

(FACTOR_HYPHEN)


[grammar] ~21-~21: Probable usage error. Use “and” after ‘both’.
Context: ...readthedocs.io/en/latest/example.html) as well as the [command line interface](https://py...

(BOTH_AS_WELL_AS)


[grammar] ~43-~43: Probable usage error. Use “and” after ‘both’.
Context: ...Support for both individual connections as well as continuous connections depending on the...

(BOTH_AS_WELL_AS)

🪛 Markdownlint
README.md

80-80: null
Bare URL used

(MD034, no-bare-urls)


81-81: null
Bare URL used

(MD034, no-bare-urls)

🔇 Additional comments (3)
README.md (3)

Line range hint 48-78: Well-structured documentation section.

The restructured documentation section greatly improves the README by providing a comprehensive and easily navigable overview of the available documentation. This change effectively supports the PR objective of updating the README.

The use of nested bullet points for subsections enhances readability and allows users to quickly find the information they need.

🧰 Tools
🪛 LanguageTool

[typographical] ~8-~8: It appears that a comma is missing.
Context: ...(HPC) does not have to be hard. In this context the aim of the Python Simple Queuing Sy...

(DURING_THAT_TIME_COMMA)


[style] ~10-~10: ‘based on the assumption that’ might be wordy. Consider a shorter alternative.
Context: ... subprocess locally. This is achieved based on the assumption that even though modern HPC queuing systems ...

(EN_WORDINESS_PREMIUM_BASED_ON_THE_ASSUMPTION_THAT)


[locale-violation] ~14-~14: In American English, ‘afterward’ is the preferred variant. ‘Afterwards’ is more commonly used in British English and other dialects.
Context: ...mit many different tasks and workflows afterwards. These templates are defined in the [ji...

(AFTERWARDS_US)


[grammar] ~18-~18: When ‘two-factor’ is used as a modifier, it is usually spelled with a hyphen.
Context: ...usters using SSH including support for two factor authentication via [pyauthenticator](ht...

(FACTOR_HYPHEN)


[grammar] ~21-~21: Probable usage error. Use “and” after ‘both’.
Context: ...readthedocs.io/en/latest/example.html) as well as the [command line interface](https://py...

(BOTH_AS_WELL_AS)


[grammar] ~43-~43: Probable usage error. Use “and” after ‘both’.
Context: ...Support for both individual connections as well as continuous connections depending on the...

(BOTH_AS_WELL_AS)


Line range hint 84-95: Citation section is appropriate.

The citation section provides the necessary information for users to properly cite the project in scientific publications. No changes are required for this section.

🧰 Tools
🪛 Markdownlint

80-80: null
Bare URL used

(MD034, no-bare-urls)


81-81: null
Bare URL used

(MD034, no-bare-urls)


Line range hint 1-95: Overall, excellent improvements to the README.

The changes made to the README significantly enhance the documentation of the pysqa project. The introduction provides a clearer overview, the features section is more detailed with method signatures, and the documentation structure is improved for better navigation.

A few minor formatting and grammatical issues have been identified in the review comments, but these are easily addressable. Once these small changes are made, this update will greatly improve the usability and clarity of the pysqa documentation.

Great work on achieving the PR objective of updating the README!

🧰 Tools
🪛 LanguageTool

[typographical] ~8-~8: It appears that a comma is missing.
Context: ...(HPC) does not have to be hard. In this context the aim of the Python Simple Queuing Sy...

(DURING_THAT_TIME_COMMA)


[style] ~10-~10: ‘based on the assumption that’ might be wordy. Consider a shorter alternative.
Context: ... subprocess locally. This is achieved based on the assumption that even though modern HPC queuing systems ...

(EN_WORDINESS_PREMIUM_BASED_ON_THE_ASSUMPTION_THAT)


[locale-violation] ~14-~14: In American English, ‘afterward’ is the preferred variant. ‘Afterwards’ is more commonly used in British English and other dialects.
Context: ...mit many different tasks and workflows afterwards. These templates are defined in the [ji...

(AFTERWARDS_US)


[grammar] ~18-~18: When ‘two-factor’ is used as a modifier, it is usually spelled with a hyphen.
Context: ...usters using SSH including support for two factor authentication via [pyauthenticator](ht...

(FACTOR_HYPHEN)


[grammar] ~21-~21: Probable usage error. Use “and” after ‘both’.
Context: ...readthedocs.io/en/latest/example.html) as well as the [command line interface](https://py...

(BOTH_AS_WELL_AS)


[grammar] ~43-~43: Probable usage error. Use “and” after ‘both’.
Context: ...Support for both individual connections as well as continuous connections depending on the...

(BOTH_AS_WELL_AS)

@jan-janssen jan-janssen merged commit 98d8e75 into main Sep 28, 2024
18 checks passed
@jan-janssen jan-janssen deleted the readme branch September 28, 2024 16:54
@coderabbitai coderabbitai bot mentioned this pull request Sep 28, 2024
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