pre-commit: update

.github/workflows/lint.yml

@@ -0,0 +1,11 @@
+name: Lint
+
+on: [push, pull_request]
+
+jobs:
+  pre-commit:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v3
+    - uses: actions/setup-python@v3
+    - uses: pre-commit/[email protected]

.pre-commit-config.yaml

@@ -1,11 +1,18 @@
 # See https://pre-commit.com for more information
 # See https://pre-commit.com/hooks.html for more hooks
 repos:
-- repo: local
+- repo: https://github.com/pre-commit/pre-commit-hooks
+  rev: v3.2.0
+  hooks:
+  - id: trailing-whitespace
+  - id: end-of-file-fixer
+  - id: check-yaml
+  - id: check-added-large-files
+- repo: https://github.com/psf/black
+  rev: 22.10.0
   hooks:
   - id: black
-    name: black
-    language: system
-    types: [python]
-    entry: black
-  #   language_version: python3.6
+- repo: https://github.com/pycqa/isort
+  rev: 5.10.1
+  hooks:
+    - id: isort

lightguide/__init__.py

@@ -1,4 +1,3 @@
 import pkg_resources
 
-
 __version__ = pkg_resources.get_distribution("lightguide").version

lightguide/filters.py

@@ -1,2 +1,2 @@
-from .lightguide import *  # noqa
 from .afk_filter_python import *  # noqa
+from .lightguide import *  # noqa

lightguide/gf.py

@@ -1,12 +1,11 @@
-import numpy as np
-
-from scipy import interpolate, ndimage, signal
 from collections.abc import Iterable
 
-from pyrocko.guts import Object, Float, List, Tuple, String, Timestamp, Bool
+import numpy as np
+import pyrocko.orthodrome as od
 from pyrocko import gf
+from pyrocko.guts import Bool, Float, List, Object, String, Timestamp, Tuple
 from pyrocko.model import Location
-import pyrocko.orthodrome as od
+from scipy import interpolate, ndimage, signal
 
 r2d = 180.0 / np.pi
 km = 1e3

lightguide/lightguide.pyi

@@ -1,7 +1,7 @@
 from __future__ import annotations
 
-import numpy.typing as npt
 import numpy as np
+import numpy.typing as npt
 
 def triangular_taper(
     window_size: tuple[int, int], plateau: tuple[int, int]

lightguide/restitution.py

@@ -1,10 +1,11 @@
 from __future__ import annotations
+
 from typing import TYPE_CHECKING
 
 import numpy as np
 from scipy import signal
-from .utils import traces_to_numpy_and_meta
 
+from .utils import traces_to_numpy_and_meta
 
 if TYPE_CHECKING:
     from pyrocko.trace import Trace

lightguide/utils.py

@@ -1,20 +1,19 @@
 from __future__ import annotations
-from enum import Enum
-from tempfile import SpooledTemporaryFile
 
-import time
 import logging
+import time
+from enum import Enum
 from functools import wraps
 from pathlib import Path
+from tempfile import SpooledTemporaryFile
 from typing import Any, Callable
-import requests
 
 import numpy as np
 import numpy.typing as npt
+import requests
 from pyrocko.trace import Trace
 from scipy.signal import butter, lfilter
 
-
 # create console handler
 ch = logging.StreamHandler()
 formatter = logging.Formatter("\x1b[80D\x1b[1A\x1b[K%(message)s")

test/conftest.py

@@ -1,4 +1,5 @@
 import pytest
+
 from lightguide import gf
 
 km = 1e3

test/test_afk_filter.py

@@ -2,6 +2,7 @@
 
 import numpy as num
 import pytest
+
 from lightguide import filters
 
 

test/test_gf.py

@@ -2,10 +2,11 @@
 
 import numpy as np
 import pytest
-from lightguide import gf
 from pyrocko import trace
 from pyrocko.model import Location
 
+from lightguide import gf
+
 km = 1e3
 
 

test/test_restitution.py

@@ -1,7 +1,7 @@
-from lightguide import restitution as res
-
 from pyrocko import trace
 
+from lightguide import restitution as res
+
 
 def test_strainrate_to_strain(syn_das_data, show_plot):
     syn_e = syn_das_data(quantity="strain", sample_rate=5.0, smoothing_sigma=100.0)

test/test_utils.py

@@ -1,7 +1,9 @@
 from pathlib import Path
-from lightguide.utils import download_http, download_numpy, ExampleData
+
 import numpy as np
 
+from lightguide.utils import ExampleData, download_http, download_numpy
+
 URLS = [url for k, url in ExampleData.__dict__.items() if not k.startswith("_")]