Improve plotting of graphs #49

	name: Build and Deploy Docs

	on:
	push:
	branches:
	- main
	- dev
	tags:
	- '*'

	jobs:
	build-and-deploy:
	runs-on: ubuntu-latest
	steps:
	- name: Checkout Code
	uses: actions/checkout@v4
	with:
	fetch-depth: 0

	- name: Set up Python
	uses: actions/setup-python@v4
	with:
	python-version: '3.11'

	- name: Setup Graphviz
	uses: ts-graphviz/setup-graphviz@v2

	- name: Install Dependencies
	run: \|
	pip install poetry
	poetry install

	- name: Build Docs with sphinx-multiversion
	run: \|
	poetry run sphinx-multiversion docs docs/_build/html

	- name: Create Redirection HTML
	run: \|
	echo '<meta http-equiv="refresh" content="0; URL='https://saezlab.github.io/corneto/main'" />' > docs/_build/html/index.html

	- name: Prepare Deployment
	run: \|
	touch ./docs/_build/html/.nojekyll
	git config --local user.email "[email protected]"
	git config --local user.name "GitHub Action"

	- name: Deploy to GitHub Pages
	run: \|
	git config --local user.email "[email protected]"
	git config --local user.name "GitHub Action"
	git fetch origin gh-pages
	git checkout gh-pages \|\| git checkout --orphan gh-pages
	# Get the name of the branch that triggered the workflow
	BRANCH_NAME=${GITHUB_REF#refs/heads/}
	echo "Deploying documentation for branch: $BRANCH_NAME"

	# Removing old files
	rm -rf "./$BRANCH_NAME"
	mkdir -p "./$BRANCH_NAME"

	# Copying new files
	cp -r "docs/_build/html/$BRANCH_NAME/." "./$BRANCH_NAME/"

	# Adding changes to git
	git add .
	git commit -m "Update docs for branch $BRANCH_NAME"
	git push -u origin gh-pages
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

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