Update README

README.md

@@ -1,12 +1,42 @@
 # imp_analysis_tutorial
 
-This tutorial focuses on analyzing the results of integrative modeling.
+This tutorial demonstrates the analysis of integrative modeling results using the [Integrative Modeling Platform](https://integrativemodeling.org) (IMP).
 
-[./rnapolii](./rnapoliii) - Imporved analysis routine for the [PMI modeling tutorial](https://github.com/salilab/imp_tutorial) of the RNA Polymerase III stalk
+[./rnapolii](./rnapoliii) - Improved analysis routine for the [PMI modeling tutorial](https://integrativemodeling.org/tutorials/rnapolii_stalk/) of the RNA Polymerase III stalk.
 
 Citations: In review
 
-### Installation and Dependencies
+## Installation and Dependencies
 
-### Introduction
+### Getting the tutorial code and data
+This tutorial can be downloaded from this page or the command line using `git clone github.com/salilab/imp_analysis_tutorial`
 
+### Installing IMP and dependencies
+
+The tutorial requires IMP v2.13 (April 2020) or later to run correctly.  
+
+---Using anaconda---
+The simplest way to install and run IMP and this tutorial is using [anaconda](https://www.anaconda.com/products/individual). 
+
+Once installed, IMP and required dependencies can be installed using the following commands
+```
+conda install -c salilab imp pyrmsd
+conda install numpy scikit-learn matplotlib pandas
+conda install -c conda-forge hdbscan
+```
+
+---Using stand-alone IMP---
+IMP [binaries or source code](https://integrativemodeling.org/download.html) are available for download. 
+
+Python 3.X is recommended to run IMP.  Dependencies can be installed via `pip`:
+
+```
+pip install numpy scikit-learn matplotlib pandas hdbscan
+```
+
+A modified version of pyRMSD must be installed as well:
+* [pyRMSD](https://github.com/salilab/pyRMSD)
+
+## Running the tutorial
+
+Navigate to `./rnapolii` and continue from the [rnapolii README](./rnapolii/README.md)