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Implement cram chunking and minimap2-based Hi-C alignments nf-core linting #372: Pull request #113 synchronize by reichan1998
September 10, 2024 15:21 1m 44s reichan1998:cram_handling
reichan1998:cram_handling
September 10, 2024 15:21 1m 44s
Added branched handling of ULI inputs in filter_pacbio nf-core linting #371: Pull request #115 opened by tkchafin
September 10, 2024 12:15 1m 26s tkchafin:uli
tkchafin:uli
September 10, 2024 12:15 1m 26s
Implement cram chunking and minimap2-based Hi-C alignments nf-core linting #370: Pull request #113 opened by reichan1998
September 10, 2024 11:51 51s reichan1998:cram_handling
reichan1998:cram_handling
September 10, 2024 11:51 51s
Merge pull request #112 from tkchafin/spoof_ref_path nf-core linting #369: Commit 6c6505d pushed by tkchafin
September 10, 2024 08:46 1m 20s dev
dev
September 10, 2024 08:46 1m 20s
spoof REF_PATH to disallow remote lookup for cram nf-core linting #368: Pull request #112 opened by tkchafin
September 9, 2024 15:06 1m 33s tkchafin:spoof_ref_path
tkchafin:spoof_ref_path
September 9, 2024 15:06 1m 33s
1.3.0 - Antipodean Opaleye nf-core linting #367: Release 1.3.0 published by tkchafin
August 23, 2024 06:50 1m 11s
August 23, 2024 06:50 1m 11s
1.3.0 Release nf-core linting #366: Pull request #109 synchronize by tkchafin
August 22, 2024 17:53 1m 22s dev
dev
August 22, 2024 17:53 1m 22s
Merge pull request #110 from sanger-tol/ci_fix nf-core linting #365: Commit ce55421 pushed by tkchafin
August 22, 2024 17:53 1m 20s dev
dev
August 22, 2024 17:53 1m 20s
Fix broken full CI test nf-core linting #364: Pull request #110 opened by tkchafin
August 22, 2024 14:42 1m 31s ci_fix
ci_fix
August 22, 2024 14:42 1m 31s
1.3.0 Release nf-core linting #363: Pull request #109 opened by tkchafin
August 22, 2024 10:55 1m 17s dev
dev
August 22, 2024 10:55 1m 17s
Merge pull request #108 from tkchafin/1.3.0 nf-core linting #362: Commit 1f1f240 pushed by tkchafin
August 22, 2024 10:49 1m 15s dev
dev
August 22, 2024 10:49 1m 15s
Version 1.3.0 pre-release nf-core linting #361: Pull request #108 synchronize by muffato
August 22, 2024 08:27 1m 22s tkchafin:1.3.0
tkchafin:1.3.0
August 22, 2024 08:27 1m 22s
Version 1.3.0 pre-release nf-core linting #360: Pull request #108 synchronize by tkchafin
August 22, 2024 08:27 1m 32s tkchafin:1.3.0
tkchafin:1.3.0
August 22, 2024 08:27 1m 32s
Version 1.3.0 pre-release nf-core linting #359: Pull request #108 synchronize by tkchafin
August 20, 2024 12:23 1m 10s tkchafin:1.3.0
tkchafin:1.3.0
August 20, 2024 12:23 1m 10s
Version 1.3.0 pre-release nf-core linting #358: Pull request #108 synchronize by tkchafin
August 20, 2024 12:09 1m 9s tkchafin:1.3.0
tkchafin:1.3.0
August 20, 2024 12:09 1m 9s
Version 1.3.0 pre-release nf-core linting #357: Pull request #108 opened by tkchafin
August 20, 2024 11:51 1m 28s tkchafin:1.3.0
tkchafin:1.3.0
August 20, 2024 11:51 1m 28s
Merge pull request #107 from tkchafin/output_options nf-core linting #356: Commit 1b91ed8 pushed by tkchafin
August 19, 2024 13:37 1m 25s dev
dev
August 19, 2024 13:37 1m 25s
Merge pull request #106 from tkchafin/pacbio_fastq nf-core linting #355: Commit 02660d4 pushed by tkchafin
August 15, 2024 08:28 1m 26s dev
dev
August 15, 2024 08:28 1m 26s
Give user control of output format and compression nf-core linting #354: Pull request #107 opened by tkchafin
August 14, 2024 16:15 1m 28s tkchafin:output_options
tkchafin:output_options
August 14, 2024 16:15 1m 28s
Pacbio fastq nf-core linting #353: Pull request #106 synchronize by tkchafin
August 14, 2024 13:39 1m 31s tkchafin:pacbio_fastq
tkchafin:pacbio_fastq
August 14, 2024 13:39 1m 31s
Pacbio fastq nf-core linting #352: Pull request #106 opened by tkchafin
August 14, 2024 13:37 1m 26s tkchafin:pacbio_fastq
tkchafin:pacbio_fastq
August 14, 2024 13:37 1m 26s
Replace BlastN by Minimap2 splice. nf-core linting #351: Pull request #104 synchronize by reichan1998
August 13, 2024 10:22 1m 19s reichan1998:try_minimap2_splice
reichan1998:try_minimap2_splice
August 13, 2024 10:22 1m 19s
Replace BlastN by Minimap2 splice. nf-core linting #350: Pull request #104 synchronize by reichan1998
August 13, 2024 10:00 1m 19s reichan1998:try_minimap2_splice
reichan1998:try_minimap2_splice
August 13, 2024 10:00 1m 19s
Implement chunking to speed up alignment nf-core linting #349: Pull request #105 opened by reichan1998
August 13, 2024 09:47 1m 16s reichan1998:implement_chunking
reichan1998:implement_chunking
August 13, 2024 09:47 1m 16s
Replace BlastN by Minimap2 splice. nf-core linting #348: Pull request #104 synchronize by reichan1998
August 13, 2024 09:15 1m 25s reichan1998:try_minimap2_splice
reichan1998:try_minimap2_splice
August 13, 2024 09:15 1m 25s