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14 Open 63 Closed
14 Open 63 Closed
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Issues list

Re-enable remote reference lookup for CRAM enhancement Improvement of the existing features
#137 opened Oct 23, 2024 by tkchafin
@tkchafin @reichan1998
Integrate filtering steps into map-reduce enhancement Improvement of the existing features
#135 opened Oct 1, 2024 by tkchafin
Incorporate fromSRA channel factory to allow read_run accessions as inputs? enhancement Improvement of the existing features
#126 opened Sep 18, 2024 by tkchafin
Illumina pre-alignment filtering enhancement Improvement of the existing features
#125 opened Sep 17, 2024 by tkchafin
PB pre-alignment filtering enhancement Improvement of the existing features
#124 opened Sep 17, 2024 by tkchafin
ONT pre-alignment filtering enhancement Improvement of the existing features
#123 opened Sep 17, 2024 by tkchafin
Hi-C pre-alignment QC enhancement Improvement of the existing features
#122 opened Sep 17, 2024 by tkchafin
Calculate mapped vs unmapped read percentages feature Requests for new features user request Requests made by users and public
#119 opened Sep 17, 2024 by tkchafin 2.0.0
1
Switch to nf-core samtools modules enhancement Improvement of the existing features
#117 opened Sep 11, 2024 by tkchafin
@tkchafin
1
Update the adaptor sequence database (TBC) bug Something isn't working
#116 opened Sep 10, 2024 by muffato 2.0.0
@tkchafin
Replace blastn sub workflow enhancement Improvement of the existing features
#114 opened Sep 10, 2024 by tkchafin
@reichan1998
Add support for RNAseq data feature Requests for new features
#73 opened Jun 27, 2023 by priyanka-surana
@reichan1998
1
Add support for Pacbio ULI reads feature Requests for new features question Further information is requested
#72 opened Jun 27, 2023 by priyanka-surana
@tkchafin
1
Calculate PacBio filtered data percentage feature Requests for new features
#71 opened Jun 27, 2023 by priyanka-surana 2.0.0
@reichan1998
1
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