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Sankaran Lab

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  1. SCAVENGE SCAVENGE Public

    SCAVENGE is a method to optimize the inference of functional and genetic associations to specific cells at single-cell resolution.

    R 80 34

  2. mecom_var mecom_var Public

    HTML 25 27

  3. mito-genotyping mito-genotyping Public

    Repo for scripts for Ludwig et al mtDNA genotyping

    R 16 11

  4. redeemR redeemR Public

    Forked from chenweng1991/redeemR

    R package for ReDeeM: single-cell Regulatory multi-omics with Deep Mitochondrial mutation profiling.

    Jupyter Notebook 6

  5. mpn-gwas mpn-gwas Public

    Analysis repository for MPN GWAS manuscript

    R 4 3

  6. SCAVENGE-reproducibility SCAVENGE-reproducibility Public

    Repository for processed data and scripts for Yu et al. SCAVENGE paper bioRxiv

    R 4 1

Repositories

Showing 10 of 15 repositories
  • redeem_reproducibility Public Forked from chenweng1991/redeem_reproducibility

    Analysis reproducibility of Weng et al paper "Deciphering cell states and genealogies of human hematopoiesis"

    sankaranlab/redeem_reproducibility’s past year of commit activity
    Jupyter Notebook 3 1 0 0 Updated Jan 22, 2024
  • redeemR Public Forked from chenweng1991/redeemR

    R package for ReDeeM: single-cell Regulatory multi-omics with Deep Mitochondrial mutation profiling.

    sankaranlab/redeemR’s past year of commit activity
    Jupyter Notebook 6 MIT 5 0 0 Updated Jan 22, 2024
  • redeemV Public Forked from chenweng1991/redeemV
    sankaranlab/redeemV’s past year of commit activity
    Jupyter Notebook 3 3 0 0 Updated Jan 22, 2024
  • SCAVENGE Public

    SCAVENGE is a method to optimize the inference of functional and genetic associations to specific cells at single-cell resolution.

    sankaranlab/SCAVENGE’s past year of commit activity
    R 80 GPL-3.0 34 6 (1 issue needs help) 1 Updated Sep 1, 2023
  • hematopoiesis_be_screens Public

    Repo for scripts for Martin-Rufino et al. hematopoiesis base editor screens

    sankaranlab/hematopoiesis_be_screens’s past year of commit activity
    1 0 0 0 Updated Aug 14, 2023
  • mecom_var Public
    sankaranlab/mecom_var’s past year of commit activity
    HTML 25 27 0 0 Updated Jan 23, 2023
  • SCAVENGE-reproducibility Public

    Repository for processed data and scripts for Yu et al. SCAVENGE paper bioRxiv

    sankaranlab/SCAVENGE-reproducibility’s past year of commit activity
    R 4 GPL-2.0 1 0 0 Updated Jun 8, 2022
  • scd-chip Public

    Information accompanying Liggett et al. 2021

    sankaranlab/scd-chip’s past year of commit activity
    1 MIT 0 0 0 Updated Jan 24, 2022
  • Fetal_Hemoglobin_model Public
    sankaranlab/Fetal_Hemoglobin_model’s past year of commit activity
    R 0 0 0 0 Updated Feb 1, 2021
  • mpn-gwas Public

    Analysis repository for MPN GWAS manuscript

    sankaranlab/mpn-gwas’s past year of commit activity
    R 4 3 0 0 Updated Oct 14, 2020
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