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40 Open 22 Closed
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Issues list

Error in validObject(object = .Object) : invalid class “Seurat” object: 'assays' must be a named list
#227 opened Dec 2, 2024 by PietroAndrei
The seuratobject version matches the seurat version
#223 opened Oct 17, 2024 by PanSX-Dr
Execution Speed of LayerData & co.
#222 opened Sep 27, 2024 by vertesy
Issue with SCTransform
#221 opened Sep 24, 2024 by AnupaSP
1
Elaborate on using 'tissue' vs 'plot' in the Crop function
#220 opened Sep 13, 2024 by Puriney
Error when merging objects
#218 opened Aug 28, 2024 by asta-a-t
Default branch change affecting remotes::install_github
#216 opened Jul 31, 2024 by dcollins15
Bug (and fix) in LogSeuratCommand when called by Seurat IntegrateData
#215 opened Jul 25, 2024 by jernest1
subset(features = ...) yields Error in .subscript.2ary(x, i, j, drop = TRUE) : subscript out of bounds after SCTransform
#208 opened May 23, 2024 by mschilli87
20
Add DefaultDimReduc<-?
#203 opened Apr 26, 2024 by samuel-marsh
Unexpected values returned by FetchData() / unsafe programming / change help
#201 opened Apr 16, 2024 by vertesy
2
SaveSeuratRds(): Is there a way to alter directory address of 'on-disk' matrices in Seurat object
#198 opened Apr 9, 2024 by Dazcam
3
Issue with SeuratObject version leads to different numbers of observation from FindAllMarkers
#196 opened Apr 2, 2024 by eunksung
Error when subsetting a joint Seuratobject
#195 opened Apr 1, 2024 by moutazhelal
Inconsistent behavior around single-cell objects
#191 opened Mar 24, 2024 by bbimber
Output of CellsByIdentities when an ident level is NA
#186 opened Feb 28, 2024 by yerahko
RenameCell error when replacing cell-names
#184 opened Feb 23, 2024 by swvanderlaan
5
Function not found error
#183 opened Jan 24, 2024 by Rahul1711arora
A warning for counts matrix and metadata with differnet cell names
#181 opened Jan 17, 2024 by moi-taiga
Velocyto- Seurat - invalid class “LogMap” object: Duplicate rownames not allowed
#179 opened Jan 11, 2024 by Ruba-Mahmoud
2
SeuratObject::merge - collapse option mentioned in documentation but not yet implemented
#175 opened Dec 20, 2023 by adam-cornwell
4
Different features in new layer data than already exists for counts
#173 opened Dec 17, 2023 by vertesy
1
readRDS(object) requires UpdateSeuratObject(object) - results in Error in [[<-: ! Cannot add new cells with [[<-
#167 opened Nov 9, 2023 by MGjorgoska
4
Create Seurat Object from matrix and two text files
#161 opened Nov 3, 2023 by sky5198
1
AddMetaData with data.frame as metadata fills NAs instead of data
#157 opened Oct 22, 2023 by jonasfreimuth
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