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- update libsbml to include new Fbc V3
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@fbergmann
fbergmann committed Sep 19, 2023
1 parent d7904e2 commit 65d3ee0
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2 changes: 1 addition & 1 deletion libsbml_source
Submodule libsbml_source updated 40 files
+10 −0 NEWS.txt
+3 −1 dev/packages/deviser-fbc_v3.xml
+1 −1 src/bindings/matlab/getDefaultValues.m
+1 −1 src/bindings/matlab/getValueType.m
+1 −1 src/bindings/matlab/test/test-data/fbcV3.xml
+1 −1 src/bindings/matlab/test/testReadFromFileFbc3.m
+1 −1 src/sbml/SBase.cpp
+5 −3 src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp
+2 −2 src/sbml/packages/fbc/extension/test/test-data/fbc_example2_v3.xml
+2 −2 src/sbml/packages/fbc/extension/test/test-data/fbc_examplev3.xml
+126 −2 src/sbml/packages/fbc/sbml/FluxObjective.cpp
+113 −0 src/sbml/packages/fbc/sbml/FluxObjective.h
+274 −48 src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp
+181 −13 src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h
+4 −2 src/sbml/packages/fbc/validator/FbcSBMLError.h
+57 −7 src/sbml/packages/fbc/validator/FbcSBMLErrorTable.h
+84 −4 src/sbml/packages/fbc/validator/constraints/FbcConsistencyConstraints.cpp
+6 −0 src/sbml/packages/fbc/validator/constraints/FbcConsistencyConstraintsDeclared.cxx
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2020206-fail-01-05.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2020213-pass-00-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2020214-fail-01-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2020214-pass-00-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021301-pass-00-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021302-pass-00-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021303-fail-01-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021303-pass-00-01.xml
+0 −88 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021304-fail-01-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021305-fail-01-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021305-pass-00-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021305-pass-00-02.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021306-fail-01-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021306-pass-00-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021401-pass-00-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021403-fail-01-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021403-fail-01-02.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021405-fail-01-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021406-fail-01-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021408-pass-00-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/general-constraints/2021409-fail-01-01.xml
+1 −1 src/sbml/packages/fbc/validator/test/test-data/identifier-constraints/2010302-fail-01-01.xml

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