snahelper
provides a set RStudio Addin for social network analysis.
The main addin is the SNAhelper
which provides a simple GUI to do
common network analytic tasks and visualize a network with
ggraph.
The second addin, called Netbuilder
allows you to quickly build small
networks with a small “canvas” to draw on. The network can be exported
as an igraph object at the end of the session by clicking on “Done”.
The third addin Netreader
is meant to facilitated the import of raw
network data. It provides a GUI to easily read network and attribute
data and combine them to an igraph object. The underlying code of the
import procedure is shown at the end. This should help users to learn
importing data themselves.
The fourth addin Componentlayouter
allows to layout networks with
several components manually by placing them on an empty canvas.
Components can also be rotated and resized. After finishing the session,
the layout is saved as x and y vertex attributes.
Code to reproduce the used network.
library(tidyverse)
library(igraph)
url <- "https://raw.githubusercontent.com/evelinag/StarWars-social-network/master/networks/starwars-full-interactions-allCharacters.json"
df <- jsonlite::fromJSON(url)
df$nodes$id <- 1:nrow(df$nodes)
df$nodes$display <- df$nodes$name
df$nodes$name <- df$nodes$id-1
g <- graph_from_data_frame(df$links,directed = F,vertices = df$nodes)
V(g)$name <- V(g)$display
g <- remove.vertex.attribute(g,"id")
g <- remove.vertex.attribute(g,"display")
g <- delete.vertices(g,which(degree(g)==0))
V(g)$display <- ifelse(V(g)$value>75,V(g)$name,"")
V(g)$colour <- ifelse(V(g)$display=="",NA,V(g)$display)
g
Netreader
should be pretty selfexplanatory. The first two tabs allow
you to import raw data (edges and attributes). Make sure to specify file
delimiters, etc. according to the shown preview.
Using the Netreader
should comes with a learning effect (hopefully).
The last tab shows the R code to produce the network with the chosen
data without using the Addin.
The network will be saved in your global environment once you click “Done”.
Highlight an igraph object in your script and selcet the
Componentlayouter
from the RStudio addin menu. Components are added by
clicking on the canvas and can be resized/rotated and re-positioned
using the buttons at the bottom. The final layout is stored as x and y
coordinates in the igraph object.
# developer version
#install.packages(remotes)
remotes::install_github("schochastics/snahelper")
#CRAN version
install.packages("snahelper")
To work properly, you also need graphlayouts, which adds new layout algorithms.
install.packages("graphlayouts")
To use the main addin, simply highlight a network in your script and
select SNAhelper
from the Addin dropdown menu.
The layout tab allows you to choose from all implemented algorithms in
igraph
and some layouts from graphlayouts
. The default is a stress
based layout and also the recommended choice. See my
blog for
an explanation. In the tweak section you can move individual nodes
around. Choose the node from the dropdown menu and click on its new
position in the plot.
The Node Attribute Manager shows all existing node attributes in a sortable table. In addition, you can calculate some new ones (centrality and clustering). The functions automatically choose the right version of indices, depending if the network is directed/weighted/undirected/unweighted.
This is where you can style your nodes. You can either do it manually, by choosing a color/size for all nodes together, or based on an attribute.
Same as Node Attribute Manager but for edges. So far only shows existing edge attributes.
You can style your edges here. snahelper
automatically detects if your
network is directed and adds arrows if the network is directed. The
other options are similar to the nodes tab. The snahelper automatically
chooses the appropriate edge geom. If multiple edges are present, it
uses geom_edge_parallel0()
. Otherwise geom_edge_link0()
.
The result tab shows the network in its full size. If you are satisfied with the results, hit the Done button and the R code to produce the plot is automatically inserted in your script. Or you can directly save the result as a png file.