2.0.1

• Clean blacklist and add only 3107
• Improve Statistics Command for usage within mtDNA-Server2

2.0.0

What's Changed

• Features/stand alone by @seppinho in #35
• Bump log4j from 2.13.1 to 2.13.2 by @dependabot in #34
• Bump log4j from 2.13.1 to 2.13.2 by @dependabot in #36
• Optimizing annotation command by @lukfor in #37
• Bump junit from 4.12 to 4.13.1 by @dependabot in #40
• Features/write filtered sites by @seppinho in #42

New Contributors

• @dependabot made their first contribution in #34

Full Changelog: v1.3.4...v2.0.0

2.0.0-rc15

v2.0.0-rc15

Prepare release v2.0.0-rc15

2.0.0-rc14

v2.0.0-rc14

Prepare release v2.0.0-rc14

v2.0.0-rc13.lpa

• This is a pre-release including adaptions to the LPA UMI approach.

v2.0.0-rc13

• Calc heteroplasmies also in area between 40 % - 60 %

v2.0.0-rc12

Merge branch 'master' of https://github.com/seppinho/mutserve

v2.0.0-rc10

• Add reference to SamReader to work with CRAM files

v2.0.0-rc9

• Add AF to VCF for homoplasmic sites

v2.0.0-rc8

• Write correct contig into vcf file
• Fix line break in raw file