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[INFRA] Update codechecker CI #895

[INFRA] Update codechecker CI

[INFRA] Update codechecker CI #895

Workflow file for this run

# SPDX-FileCopyrightText: 2006-2023, Knut Reinert & Freie Universität Berlin
# SPDX-FileCopyrightText: 2016-2023, Knut Reinert & MPI für molekulare Genetik
# SPDX-License-Identifier: CC0-1.0
name: Coverage
on:
push:
branches:
- 'main'
pull_request:
types:
- unlabeled
workflow_dispatch:
concurrency:
group: coverage-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: false
env:
TZ: Europe/Berlin
defaults:
run:
shell: bash -Eexuo pipefail {0}
jobs:
build:
runs-on: ubuntu-latest
name: ${{ matrix.compiler }}
if: github.repository_owner == 'seqan' || github.event_name == 'workflow_dispatch' || github.event.label.name == 'lint'
strategy:
fail-fast: false
matrix:
compiler: ["gcc-14"]
container:
image: ghcr.io/seqan/${{ matrix.compiler }}
volumes:
- /home/runner:/home/runner
steps:
- name: Checkout
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Load ccache
uses: actions/cache@v4
with:
path: /home/runner/.ccache
key: ccache-${{ runner.os }}-${{ github.workflow }}-${{ matrix.compiler }}-${{ github.ref }}
- name: Configure tests
run: |
mkdir build
cd build
cmake ../test/coverage -DCMAKE_BUILD_TYPE=Coverage
make -j gtest_main
- name: Build tests
working-directory: build
run: |
ccache -z
make -k -j
ccache -sv
- name: Run tests
working-directory: build
run: ctest . -j --output-on-failure
- name: Generate coverage report
run: |
gcovr --root ${GITHUB_WORKSPACE}/test/coverage \
${GITHUB_WORKSPACE}/build \
--filter ${GITHUB_WORKSPACE}/include \
--filter ${GITHUB_WORKSPACE}/test/include \
--filter ${GITHUB_WORKSPACE}/src \
--exclude ${GITHUB_WORKSPACE}/include/hibf/contrib \
--exclude ${GITHUB_WORKSPACE}/test/include/hibf/test/iterator_test_template.hpp \
--exclude-lines-by-pattern '^\s*$' \
--exclude-lines-by-pattern '^\s*};$' \
--exclude-unreachable-branches \
--exclude-throw-branches \
--exclude-noncode-lines \
--merge-mode-functions separate \
-j \
--cobertura \
--output ${GITHUB_WORKSPACE}/build/coverage_report.xml
- name: Submit coverage build
uses: codecov/[email protected]
with:
files: build/coverage_report.xml
fail_ci_if_error: false