Add default plot functions for other biokinetics outputs #169

	# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
	# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
	on:
	push:
	branches: [main, master]
	pull_request:
	branches: [main, master]
	release:
	types: [published]
	workflow_dispatch:

	name: pkgdown

	jobs:
	pkgdown:
	runs-on: ubuntu-latest
	# Only restrict concurrency for non-PR jobs
	concurrency:
	group: pkgdown-${{ github.event_name != 'pull_request' \|\| github.run_id }}
	env:
	GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
	steps:
	- uses: actions/checkout@v3

	- uses: r-lib/actions/setup-pandoc@v2

	- uses: r-lib/actions/setup-r@v2
	with:
	use-public-rspm: true
	- name: cmdstan env vars
	run: \|
	echo "CMDSTAN=${HOME}/.cmdstan" >> $GITHUB_ENV
	shell: bash

	- name: Repos
	run: \|
	cat("\noptions(repos=c(ropensci='https://ropensci.r-universe.dev',CRAN ='https://cloud.r-project.org', stan = 'https://stan-dev.r-universe.dev'))\n", file = "~/.Rprofile", append = TRUE)
	shell: Rscript {0}

	- name: Install cmdstan
	run: \|
	install.packages("cmdstanr")
	cmdstanr::check_cmdstan_toolchain(fix = TRUE)
	cmdstanr::install_cmdstan(cores = 2)
	shell: Rscript {0}

	- uses: r-lib/actions/setup-r-dependencies@v2
	with:
	extra-packages: any::pkgdown, local::.
	needs: website

	- name: Build site
	run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
	shell: Rscript {0}

	- name: Deploy to GitHub pages 🚀
	if: github.event_name != 'pull_request'
	uses: JamesIves/[email protected]
	with:
	clean: false
	branch: gh-pages
	folder: docs

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