core: drop 2016 cutoff from core tables

cumulus_library/studies/core/core_templates/allergyintolerance.sql.jinja

@@ -134,5 +134,4 @@ LEFT JOIN core__allergyintolerance_dn_code AS dn_code ON ta.id = dn_code.id
 LEFT JOIN core__allergyintolerance_dn_clinical_status AS dn_cstat ON ta.id = dn_cstat.id
 LEFT JOIN core__allergyintolerance_dn_verification_status AS dn_vstat
     ON ta.id = dn_vstat.id
-LEFT JOIN temp_category AS tcat ON ta.id = tcat.id
-WHERE ta.recordedDate BETWEEN date('2016-01-01') AND current_date;
+LEFT JOIN temp_category AS tcat ON ta.id = tcat.id;

cumulus_library/studies/core/core_templates/condition.sql.jinja

@@ -80,5 +80,4 @@ SELECT
 FROM temp_condition AS tc
 LEFT JOIN core__condition_dn_category AS cdc ON tc.id = cdc.id
 LEFT JOIN core__condition_dn_clinical_status AS cdcs ON tc.id = cdcs.id
-LEFT JOIN core__condition_dn_verification_status AS cdvs ON tc.id = cdvs.id
-WHERE tc.recordedDate BETWEEN date('2016-01-01') AND current_date;
+LEFT JOIN core__condition_dn_verification_status AS cdvs ON tc.id = cdvs.id;

cumulus_library/studies/core/core_templates/documentreference.sql.jinja

@@ -89,5 +89,4 @@ SELECT DISTINCT
     te.encounter_ref,
     concat('DocumentReference/', tdr.id) AS documentreference_ref
 FROM temp_documentreference AS tdr
-LEFT JOIN temp_encounters AS te ON tdr.id = te.id
-WHERE date(tdr.author_day) BETWEEN date('2016-06-01') AND current_date;
+LEFT JOIN temp_encounters AS te ON tdr.id = te.id;

cumulus_library/studies/core/core_templates/encounter.sql.jinja

@@ -137,6 +137,4 @@ FROM temp_encounter AS e
 LEFT JOIN core__fhir_mapping_expected_act_encounter_code_v3 AS eac
     ON e.class_code = eac.found
 LEFT JOIN core__fhir_act_encounter_code_v3 AS ac ON eac.expected = ac.code
-INNER JOIN core__patient AS p ON e.subject_ref = p.subject_ref
-WHERE
-    e.period_start_day BETWEEN date('2016-06-01') AND current_date;
+INNER JOIN core__patient AS p ON e.subject_ref = p.subject_ref;

cumulus_library/studies/core/core_templates/observation.sql.jinja

@@ -90,8 +90,4 @@ SELECT
     subject_ref,
     encounter_ref,
     concat('Observation/', id) AS observation_ref
-FROM temp_observation
-WHERE
-    effectiveDateTime_day BETWEEN date(
-        from_iso8601_timestamp('2016-06-01')
-    ) AND current_date;
+FROM temp_observation;

tests/core/test_core_allergy.py

@@ -229,17 +229,6 @@ def test_core_allergy_many_cases(tmp_path):
     assert expected_set == dict_set_from_list(rows)
 
 
-def test_core_allergy_date_cutoff(tmp_path):
-    """Verify that we ignore rows before 2016"""
-    testbed = testbed_utils.LocalTestbed(tmp_path)
-    testbed.add_allergy_intolerance("Old", recorded="2015")
-    testbed.add_allergy_intolerance("New", recorded="2016")
-
-    con = testbed.build()
-    df = con.sql("SELECT id FROM core__allergyintolerance").df()
-    assert ["New"] == list(df.id)
-
-
 @mock.patch("cumulus_library.builders.counts.DEFAULT_MIN_SUBJECT", new=1)
 def test_core_count_allergy_intolerance_by_patient(tmp_path):
     """Verify that our basic allergy count is per-patient"""